RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 KCNB2Q92953 911 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 NMD3Q96D46 503 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PAGR1Q9BTK6 254 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZCCHC2Q9C0B9 1178 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 COPS7BQ9H9Q2 264 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 EHD3Q9NZN3 535 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TRIM10Q9UDY6 481 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TNPO3Q9Y5L0 923 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 FAM20BO75063 409 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RAPGEF3O95398 923 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PEPDP12955 493 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 GCLMP48507 274 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SLC15A2Q16348 729 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LENG1Q96BZ8 264 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 PTCD3Q96EY7 689 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 RBAKQ9NYW8 714 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 HEY2Q9UBP5 337 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 CHORDC1Q9UHD1 332 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ST3GAL5Q9UNP4 418 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ERVV-1B6SEH8 477 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 LSM8O95777 96 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ATP1A1P05023 1023 aaKnown RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 ALOX12P18054 663 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ATP6V1B2P21281 511 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 CHI3L1P36222 383 aaPredicted RBP5.62□□□□□ -1.51
XRN1-201ENST00000264951 MTMR1Q13613 665 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PLET1Q6UQ28 207 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 CLEC4GQ6UXB4 293 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 ZNF554Q86TJ5 538 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 IZUMO1Q8IYV9 350 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 PGM2Q96G03 612 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SLC38A2Q96QD8 506 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RNPEPQ9H4A4 650 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 RAD18Q9NS91 495 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
XRN1-201ENST00000264951 SMIM22K7EJ46 135 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 ATP6V1G2O95670 118 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RBP3P10745 1247 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CRABP2P29373 138 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 INSCQ1MX18 579 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 KIZQ2M2Z5 673 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 TBCELQ5QJ74 424 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RNF135Q8IUD6 432 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 TMEM132CQ8N3T6 1108 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 C7orf25Q9BPX7 421 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 ZCCHC17Q9NP64 241 aaKnown RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 HPS4Q9NQG7 708 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 A2MP01023 1474 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 STX16-NPEPL1H3BU86 382 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 STX16O14662 325 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CRTAMO95727 393 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 NOS3P29474 1203 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 IL6STP40189 918 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 ACADVLP49748 655 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 IL5RAQ01344 420 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 NFYCQ13952 458 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 SUN5Q8TC36 379 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 FAM172AQ8WUF8 416 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RNPEPL1Q9HAU8 725 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 GPN3Q9UHW5 284 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 MKLN1Q9UL63 735 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 ANKARQ7Z5J8 1434 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CDK12Q9NYV4 1490 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 KCNQ3O43525 872 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 HSMCR30P0CW71 290 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 TGM2P21980 687 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 DCKP27707 260 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 PEX3P56589 373 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CSNK2BP67870 215 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 VAC14Q08AM6 782 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 PRR5LQ6MZQ0 368 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.61□□□□□ -1.51
XRN1-201ENST00000264951 DCP1BQ8IZD4 617 aaKnown RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 MYO1HQ8N1T3 1032 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 MAGEC3Q8TD91 643 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RPRD1AQ96P16 312 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 PCIF1Q9H4Z3 704 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CRYL1Q9Y2S2 319 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 GJA3Q9Y6H8 435 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 RAPGEF6Q8TEU7 1601 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 ZNF879B4DU55 563 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 SOAT1P35610 550 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RFC5P40937 340 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 TRAF2Q12933 501 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 MTERF2Q49AM1 385 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 AAGABQ6PD74 315 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 RP9Q8TA86 221 aaKnown RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 UPB1Q9UBR1 384 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CROTQ9UKG9 612 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 WFS1O76024 890 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 GRK4P32298 578 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 PRCPP42785 496 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 PPP3CCP48454 512 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 ANKRD40Q6AI12 368 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 NET1Q7Z628 596 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 ZNF589Q86UQ0 364 aaPredicted RBP5.61□□□□□ -1.51
XRN1-201ENST00000264951 DNAAF5Q86Y56 855 aa5.61□□□□□ -1.51
XRN1-201ENST00000264951 CMTR1Q8N1G2 835 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms