RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 RNASE9P60153 205 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 PTENP60484 403 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 DR1Q01658 176 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 IFFO1Q0D2I5 559 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 PRPF4BQ13523 1007 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 SIM2Q14190 667 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CBWD6Q4V339 395 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 ODF2Q5BJF6 829 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CBWD3Q5JTY5 395 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CBWD5Q5RIA9 395 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CEP85LQ5SZL2 805 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 TWF2Q6IBS0 349 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 SWSAP1Q6NVH7 229 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 EFCAB12Q6NXP0 572 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 GJB7Q6PEY0 223 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 ELMSAN1Q6PJG2 1045 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 ABHD15Q6UXT9 468 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CEP128Q6ZU80 1094 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 GRASPQ7Z6J2 395 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 DAW1Q8N136 415 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 TSEN2Q8NCE0 465 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 DDX1Q92499 740 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 SEC14L1Q92503 715 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CLDN23Q96B33 292 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 SYT11Q9BT88 431 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 HERC2P3Q9BVR0 1158 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 OSBPL6Q9BZF3 934 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 PCIF1Q9H4Z3 704 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 TMBIM4Q9HC24 238 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 HEBP1Q9NRV9 189 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 MARCH5Q9NX47 278 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 FEZ2Q9UHY8 353 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 CDH7Q9ULB5 785 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 ATXN2Q99700 1313 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 VWA8A3KMH1 1905 aa7.42□□□□□ -1.22
SMARCE1-201ENST00000264640 ARID2Q68CP9 1835 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 HELZ2Q9BYK8 2649 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 A0A087WUV0 522 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SHISA7A6NL88 538 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 CHURC1-FNTBB4DL54 471 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 MYO1CO00159 1063 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 NRP1O14786 923 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ZBTB39O15060 712 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SLC16A4O15374 487 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 DDX3YO15523 660 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 TGM5O43548 720 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SPOPO43791 374 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 PHF2O75151 1096 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 TOP3BO95985 862 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 LDHAP00338 332 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 POMCP01189 267 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SOD2P04179 222 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 RPL17P18621 184 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 CTNNA2P26232 953 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 HSD17B3P37058 310 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 MAGEA9P43362 315 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 RPS9P46781 194 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 GCLMP48507 274 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FNTBP49356 437 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SATB1Q01826 763 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 STRN3Q13033 797 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FZD5Q13467 585 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 DRP2Q13474 957 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SLMAPQ14BN4 828 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SNRNP35Q16560 246 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 TTMPQ5BVD1 217 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 LIN9Q5TKA1 542 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 HEATR6Q6AI08 1181 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SLFN12LQ6IEE8 588 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 MIS18BP1Q6P0N0 1132 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 TRIM72Q6ZMU5 477 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 SYDE1Q6ZW31 735 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FAM71AQ8IYT1 594 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 PPM1KQ8N3J5 372 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 CELF5Q8N6W0 485 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 LINC01465Q8N7H1 131 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ZNF511Q8NB15 262 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FBXL13Q8NEE6 735 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 LMO3Q8TAP4 145 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ITFG1Q8TB96 612 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 BCAS4Q8TDM0 211 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 GRK7Q8WTQ7 553 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 UBLCP1Q8WVY7 318 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ING5Q8WYH8 240 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FGF13Q92913 245 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 BICD1Q96G01 975 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FMO2Q99518 471 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ZSWIM1Q9BR11 485 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 ERP44Q9BS26 406 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 KLF16Q9BXK1 252 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 AP1M1Q9BXS5 423 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 FAM126AQ9BYI3 521 aaPredicted RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 DDX47Q9H0S4 455 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-201ENST00000264640 EPN3Q9H201 632 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms