RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 TMEFF1Q8IYR6 380 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 CHPFQ8IZ52 775 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 CRYBG2Q8N1P7 616 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 HEXIM2Q96MH2 286 aaKnown RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 CDK5RAP1Q96SZ6 601 aaKnown RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 GZF1Q9H116 711 aaPredicted RBP12.92□□□□□ -0.34
TRAF4-202ENST00000262396 HMGXB4Q9UGU5 601 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 DNMT3LQ9UJW3 386 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 PCDHA5Q9Y5H7 936 aa12.92□□□□□ -0.34
TRAF4-202ENST00000262396 OBSL1O75147 1896 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TNFRSF10BO14763 440 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 CYP26A1O43174 497 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 AP5Z1O43299 807 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 KCNK5O95279 499 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TBX18O95935 607 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 CFIP05156 583 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 EPB41P11171 864 aaKnown RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 BCKDHBP21953 392 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 ASPAP45381 313 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 MAPK8P45983 427 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 NDUFA8P51970 172 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TRIM61Q5EBN2 209 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 N4BP2L1Q5TBK1 243 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 SNX30Q5VWJ9 437 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 LYSMD4Q5XG99 296 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 SLC36A4Q6YBV0 504 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 PAQR9Q6ZVX9 377 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 MIB1Q86YT6 1006 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TERB1Q8NA31 727 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 BHMTQ93088 406 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 HNRNPABQ99729 332 aaKnown RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TSG101Q99816 390 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 LSM14BQ9BX40 385 aaKnown RBP12.91□□□□□ -0.34
TRAF4-202ENST00000262396 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 TRAF3IP3Q9Y228 551 aa12.91□□□□□ -0.34
TRAF4-202ENST00000262396 SPTBN2O15020 2390 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 A0A1W2PQH9 124 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 CETN3O15182 167 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 MAPK13O15264 365 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 NDUFS2O75306 463 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 BEST1O76090 585 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 RHOBTB3O94955 611 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 CYBBP04839 570 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 HMBSP08397 361 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 TYRP14679 529 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 NTSR1P30989 418 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 P2RY2P41231 377 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 DGKGP49619 791 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 PSEN1P49768 467 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 ARID5AQ03989 594 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 GAB4Q2WGN9 574 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 DCAF17Q5H9S7 520 aaPredicted RBP12.9□□□□□ -0.34
TRAF4-202ENST00000262396 KRT39Q6A163 491 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 SFTPA1Q8IWL2 248 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 ARHGAP18Q8N392 663 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 HDDC3Q8N4P3 179 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 DEFB119Q8N690 84 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 ERLEC1Q96DZ1 483 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 GTPBP2Q9BX10 602 aaKnown RBP12.9□□□□□ -0.34
TRAF4-202ENST00000262396 SLC32A1Q9H598 525 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 TMEM8AQ9HCN3 771 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 CSNK1G1Q9HCP0 422 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
TRAF4-202ENST00000262396 LNP1A1A4G5 178 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ZNF217O75362 1048 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 MXI1P50539 228 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 COG7P83436 770 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 FOXC1Q12948 553 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 STARD3Q14849 445 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 E2F5Q15329 346 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 KIAA1324Q6UXG2 1013 aaKnown RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 CLEC20AQ6ZU45 233 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 SYT12Q8IV01 421 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 RGL4Q8IZJ4 473 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 GUF1Q8N442 669 aaKnown RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ZMIZ2Q8NF64 920 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 UCMAQ8WVF2 138 aa12.89□□□□□ -0.35
TRAF4-202ENST00000262396 ZFRQ96KR1 1074 aaKnown RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
TRAF4-202ENST00000262396 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms