RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 COMTP21964 271 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 WDR4P57081 412 aaKnown RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 STK11Q15831 433 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 UBAP2Q5T6F2 1119 aaKnown RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 MSTO1Q9BUK6 570 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 EDEM3Q9BZQ6 932 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 SEPT10Q9P0V9 454 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 HSFX1Q9UBD0 423 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 CPA3P15088 417 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 RFX1P22670 979 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 TCF7P36402 384 aaPredicted RBP13.42□□□□□ -0.26
TMEM260-201ENST00000261556 PLIN5Q00G26 463 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 NIPAL1Q6NVV3 410 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 UNC13DQ70J99 1090 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 LDHDQ86WU2 507 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 RHOT2Q8IXI1 618 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 BBS2Q9BXC9 721 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 POU2F3Q9UKI9 436 aa13.42□□□□□ -0.26
TMEM260-201ENST00000261556 A0A1W2PQ67 120 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 KRT20P35900 424 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SLC1A1P43005 524 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SLC12A2P55011 1212 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SCARA5Q6ZMJ2 495 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 VASH1Q7L8A9 365 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 JADE3Q92613 823 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 GCOM2Q9BZD3 368 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 RPTORQ8N122 1335 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 FARP2O94887 1054 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 BMP10O95393 424 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 ATP5OP48047 213 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SEPHS1P49903 392 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 FAM117BQ6P1L5 589 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SETD3Q86TU7 594 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 STK39Q9UEW8 545 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SIK3Q9Y2K2 1263 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 LAMC1P11047 1609 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 PRR5-ARHGAP8B1AHC4 643 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 TMEM114B3SHH9 223 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 TOR1BO14657 336 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 CCNKO75909 580 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 NDUFB10O96000 172 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 HSPA13P48723 471 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 ARHGAP8P85298 464 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 ITKQ08881 620 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SULT1C3Q6IMI6 304 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 HPS6Q86YV9 775 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 PSMA8Q8TAA3 256 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 DMRTB1Q96MA1 342 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 PANX3Q96QZ0 392 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
TMEM260-201ENST00000261556 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 UBE4BO95155 1302 aa13.41□□□□□ -0.26
TMEM260-201ENST00000261556 PPRC1Q5VV67 1664 aaKnown RBP13.4□□□□□ -0.26
TMEM260-201ENST00000261556 ITM2AO43736 263 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 CRCPO75575 148 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TM7SF2O76062 418 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 NR4A2P43354 598 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
TMEM260-201ENST00000261556 PKNOX1P55347 436 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 LSM3P62310 102 aaKnown RBP13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SWSAP1Q6NVH7 229 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SDR16C5Q8N3Y7 309 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 THAP2Q9H0W7 228 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 C8orf4Q9NR00 106 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 RICTORQ6R327 1708 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 ANKRD34BA5PLL1 514 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SAC3D1A6NKF1 404 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 ECHS1P30084 290 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SLC5A2P31639 672 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 PRELPP51888 382 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 BLVRAP53004 296 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TAF5Q15542 800 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TWF2Q6IBS0 349 aaKnown RBP13.4□□□□□ -0.26
TMEM260-201ENST00000261556 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TTC30BQ8N4P2 665 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 POC5Q8NA72 575 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 TMIGD2Q96BF3 282 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 HMG20AQ9NP66 347 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 SNX5Q9Y5X3 404 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 A0A087WXM4 84 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 QARSP47897 775 aaKnown RBP13.4□□□□□ -0.26
TMEM260-201ENST00000261556 JAK3P52333 1124 aa13.4□□□□□ -0.26
TMEM260-201ENST00000261556 CAV1Q03135 178 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms