RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 VSTM1Q6UX27 236 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 GSTA5Q7RTV2 222 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 FAM228AQ86W67 206 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 VSIG1Q86XK7 387 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 TEKT4Q8WW24 435 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 LPIN3Q9BQK8 851 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 WDR83Q9BRX9 315 aaKnown RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 ADAM33Q9BZ11 813 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 FAM49BQ9NUQ9 324 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 CTNNAL1Q9UBT7 734 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 PIN4Q9Y237 131 aaKnown RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 M0QZ92 97 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 MGEA5O60502 916 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 RNF8O76064 485 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 PDGFRAP16234 1089 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 SLC6A3Q01959 620 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 PDE4CQ08493 712 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 FASTKD3Q14CZ7 662 aaKnown RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 NOMO1Q15155 1222 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 ZFYVE27Q5T4F4 411 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 OR6B2Q6IFH4 312 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 C6orf89Q6UWU4 347 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 CEP128Q6ZU80 1094 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 CPT1BQ92523 772 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 FAF2Q96CS3 445 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 C9orf72Q96LT7 481 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 STMN4Q9H169 189 aaPredicted RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 RSAD1Q9HA92 442 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 RNF19AQ9NV58 838 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 ST3GAL5Q9UNP4 418 aa18.43■□□□□ 0.54
SSB-201ENST00000260956 COL4A4P53420 1690 aaPredicted RBP18.43■□□□□ 0.54
SSB-201ENST00000260956 TSC2P49815 1807 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 ZBBXA8MT70 800 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 E7EVH7 732 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 PIK3R2O00459 728 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 EBAG9O00559 213 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 ALOX15BO15296 676 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 DYNLT1P63172 113 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 MMRN1Q13201 1228 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 ARCQ7LC44 396 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 CYP4X1Q8N118 509 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 NAT8LQ8N9F0 302 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 SEPT8Q92599 483 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 PPANQ9NQ55 473 aaKnown RBP18.42■□□□□ 0.54
SSB-201ENST00000260956 CYLDQ9NQC7 956 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 IPPQ9Y573 584 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 SQORQ9Y6N5 450 aa18.42■□□□□ 0.54
SSB-201ENST00000260956 A0A1W2PPC1 479 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 ZNF487B1APH4 448 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 E7ESA3 106 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 MYO1CO00159 1063 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 PTGESO14684 152 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 LRPAP1P30533 357 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 RPL22P35268 128 aaKnown RBP18.41■□□□□ 0.54
SSB-201ENST00000260956 PTPN9P43378 593 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 STAT4Q14765 748 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 ANKRD22Q5VYY1 191 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 DPH6Q7L8W6 267 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 SLC26A9Q7LBE3 791 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 OSTM1Q86WC4 334 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 UNC45BQ8IWX7 931 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 PQLC3Q8N755 202 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 HSPH1Q92598 858 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 CENPIQ92674 756 aaPredicted RBP18.41■□□□□ 0.54
SSB-201ENST00000260956 C10orf88Q9H8K7 445 aa18.41■□□□□ 0.54
SSB-201ENST00000260956 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.4■□□□□ 0.54
SSB-201ENST00000260956 CREB1P16220 341 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 HDAC4P56524 1084 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 PPARDQ03181 441 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 GAD2Q05329 585 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 IKBKEQ14164 716 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 LRIT3Q3SXY7 679 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 CCDC38Q502W7 563 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 TDRPQ86YL5 185 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 ZDHHC17Q8IUH5 632 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 ANKRD52Q8NB46 1076 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 MAML1Q92585 1016 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 LRCH3Q96II8 777 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 CFAP57Q96MR6 1250 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 ZNF560Q96MR9 790 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 PPP1R10Q96QC0 940 aaKnown RBP18.4■□□□□ 0.54
SSB-201ENST00000260956 TBCBQ99426 244 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.54
SSB-201ENST00000260956 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 FAM169AQ9Y6X4 670 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 COL6A3P12111 3177 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 CLUHO75153 1309 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 ABHD14A-ACY1A0A1B0GW23 586 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 KPNA7A9QM74 516 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 SGK1O00141 431 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 ENPP3O14638 875 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 NDC80O14777 642 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 MDM4O15151 490 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 GRAP2O75791 330 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 CCDC130P13994 396 aa18.4■□□□□ 0.54
SSB-201ENST00000260956 TFE3P19532 575 aaPredicted RBP18.4■□□□□ 0.54
SSB-201ENST00000260956 LMO2P25791 158 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms