RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 RILPQ96NA2 401 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 AGAP3Q96P47 875 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 CDHR5Q9HBB8 845 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 PCDH18Q9HCL0 1135 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 SLC40A1Q9NP59 571 aa16.32■□□□□ 0.2
RFX1-201ENST00000254325 DDX43Q9NXZ2 648 aaKnown RBP16.32■□□□□ 0.2
RFX1-201ENST00000254325 PPP1R12AO14974 1030 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 ZWINTO95229 277 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 NCAM1P13591 858 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 NRLP54845 237 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 GRB14Q14449 540 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 NOMO1Q15155 1222 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 ZRSR2Q15696 482 aaKnown RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 DENND5BQ6ZUT9 1274 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 LRRC6Q86X45 466 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PGBD4Q96DM1 585 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 FRMD8Q9BZ67 464 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 TXLNGQ9NUQ3 528 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 TRIM49D1C9J1S8 452 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 DCTN3O75935 186 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 THP07101 528 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 WSCD1Q658N2 575 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 KCNT2Q6UVM3 1135 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 CMASQ8NFW8 434 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 GAD1Q99259 594 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 SIK2Q9H0K1 926 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.31■□□□□ 0.25e-8■□□□□ 9.3
RFX1-201ENST00000254325 PHTF1Q9UMS5 762 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 TKTL1P51854 596 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 YWHAZP63104 245 aaKnown RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 TMPRSS15P98073 1019 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PCBP1Q15365 356 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■□□ 17
RFX1-201ENST00000254325 TRABD2AQ86V40 505 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 TTC30AQ86WT1 665 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 CASTOR2A6NHX0 329 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PAPSS1O43252 624 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 SNX3O60493 162 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 E2F5Q15329 346 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 TAF2Q6P1X5 1199 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 FAM193BQ96PV7 902 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 RAB3IPQ96QF0 476 aaPredicted RBP16.31■□□□□ 0.2
RFX1-201ENST00000254325 NPHS2Q9NP85 383 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 IPPQ9Y573 584 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 ACTL7BQ9Y614 415 aa16.31■□□□□ 0.2
RFX1-201ENST00000254325 PTPN7P35236 360 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 FNBP1LQ5T0N5 605 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 CXCL17Q6UXB2 119 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 B3GALNT2Q8NCR0 500 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 NRDE2Q9H7Z3 1164 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 UBOX5O94941 541 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 AKR1A1P14550 325 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 RPA3P35244 121 aaPredicted RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 THPOP40225 353 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 EFTUD2Q15029 972 aaKnown RBP eCLIP16.3■□□□□ 0.2
RFX1-201ENST00000254325 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 SCN4BQ8IWT1 228 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 TRIM42Q8IWZ5 723 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 KCNN1Q92952 543 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 ZMAT2Q96NC0 199 aaKnown RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 CEP41Q9BYV8 373 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 DDIT4Q9NX09 232 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 CLDN5O00501 218 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 HCRTO43612 131 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 AVILO75366 819 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 B3GAT3O94766 335 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 SAT1P21673 171 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 LMO2P25791 158 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 CRYBB1P53674 252 aaPredicted RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 PDK1Q15118 436 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 PLD5Q8N7P1 536 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 MAML1Q92585 1016 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 PIWIL1Q96J94 861 aaKnown RBP16.3■□□□□ 0.2
RFX1-201ENST00000254325 ETNK1Q9HBU6 452 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 KAT6AQ92794 2004 aa16.3■□□□□ 0.2
RFX1-201ENST00000254325 PCSK1P29120 753 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 HNRNPH1P31943 449 aaKnown RBP16.29■□□□□ 0.2
RFX1-201ENST00000254325 GARSP41250 739 aaKnown RBP16.29■□□□□ 0.2
RFX1-201ENST00000254325 SOWAHAQ2M3V2 549 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 C4orf22Q6V702 233 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 THEM5Q8N1Q8 247 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 ZFP42Q96MM3 310 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 FAM111AQ96PZ2 611 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 SYT15Q9BQS2 421 aa16.29■□□□□ 0.2
RFX1-201ENST00000254325 VRTNQ9H8Y1 702 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms