RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SNX32Q86XE0 403 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 PYDC1Q8WXC3 89 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 EPAS1Q99814 870 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 HACD3Q9P035 362 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 UBIAD1Q9Y5Z9 338 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 C3orf70A6NLC5 250 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 APOEP02649 317 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 MCF2P10911 925 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 KCNA4P22459 653 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 UBAP2LQ14157 1087 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 SGO1Q5FBB7 561 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ANKRD22Q5VYY1 191 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 RFWD3Q6PCD5 774 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 SLC7A14Q8TBB6 771 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 NCLNQ969V3 563 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CELF6Q96J87 481 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CATSPER2Q96P56 530 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 HAUS8Q9BT25 410 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 AP4E1Q9UPM8 1137 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 V9GYQ6 96 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ECM29Q5VYK3 1845 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 SPDYE16A6NNV3 312 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 SPDYE2Q495Y8 402 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 AGKQ53H12 422 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 OLFML2BQ68BL8 750 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 MAP4K3Q8IVH8 894 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 TDRD5Q8NAT2 981 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 P2RX7Q99572 595 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 MROH7Q68CQ1 1323 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 UBR2Q8IWV8 1755 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 EDF1O60869 148 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 USP12O75317 370 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CCNE2O96020 404 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 WDR4P57081 412 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 OASLQ15646 514 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 RNF148Q8N7C7 305 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 PABPC5Q96DU9 382 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CCT7Q99832 543 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 DDX50Q9BQ39 737 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 IDI2Q9BXS1 227 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 FAM96AQ9H5X1 160 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 PAPOLBQ9NRJ5 636 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 EEF2KO00418 725 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 PEX10O60683 326 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 USP1O94782 785 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ASS1P00966 412 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 RALBP11234 206 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CPA3P15088 417 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 NUMBP49757 651 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 CXCL9Q07325 125 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 C16orf87Q6PH81 154 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF518BQ9C0D4 1074 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 TSPYL2Q9H2G4 693 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 XPNPEP3Q9NQH7 507 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 SHROOM3Q8TF72 1996 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 DISP2A7MBM2 1401 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGAP10A1A4S6 786 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 C6orf222P0C671 652 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ERVK-10P10266 1014 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 TCF7P36402 384 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 BAG6P46379 1132 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 BACE1P56817 501 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 DSG1Q02413 1049 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ZC3H12AQ5D1E8 599 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 RARS2Q5T160 578 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 BRSK2Q8IWQ3 736 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 FAM193BQ96PV7 902 aaPredicted RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM109Q9BVC6 243 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 UNKQ9C0B0 810 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 KLHL4Q9C0H6 718 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 KRT82Q9NSB4 513 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 AURKCQ9UQB9 309 aa4.77□□□□□ -1.65
VPS13C-201ENST00000249837 PIN4Q9Y237 131 aaKnown RBP4.77□□□□□ -1.65
VPS13C-201ENST00000249837 ZC3H4Q9UPT8 1303 aaKnown RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 C5orf60A6NFR6 353 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF286BP0CG31 522 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SH3BGRP55822 239 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PLIN5Q00G26 463 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PARP6Q2NL67 630 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 TMPRSS6Q8IU80 811 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CHST13Q8NET6 341 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CXorf38Q8TB03 319 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 USP13Q92995 863 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CLPTM1LQ96KA5 538 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SPC25Q9HBM1 224 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SLC5A4Q9NY91 659 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 LRCH1Q9Y2L9 728 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CICQ96RK0 1608 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 AVILO75366 819 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 ITGAVP06756 1048 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CDK16Q00536 496 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 IRGCQ6NXR0 463 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PHF13Q86YI8 300 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SCUBE3Q8IX30 993 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 SAR1AQ9NR31 198 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 C19orf81C9J6K1 198 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 AKAP10O43572 662 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 HNRNPCP07910 306 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13C-201ENST00000249837 CFHP08603 1231 aa4.76□□□□□ -1.65
VPS13C-201ENST00000249837 PAEPP09466 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms