RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PRCCQ92733 491 aaPredicted RBP24.23■■□□□ 1.47
MSX2-201ENST00000239243 PWWP2AQ96N64 755 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 OSBPL7Q9BZF2 842 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 DSEQ9UL01 958 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 AP4E1Q9UPM8 1137 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 DCDC2CA8MYV0 355 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 NOS2P35228 1153 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 RPL22P35268 128 aaKnown RBP24.23■■□□□ 1.47
MSX2-201ENST00000239243 TUSC3Q13454 348 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 TNFAIP8L3Q5GJ75 292 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 KIAA0319Q5VV43 1072 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 FAM35AQ86V20 835 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 UNC45BQ8IWX7 931 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 DEFB106AQ8N104 65 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 MYCBPAPQ8TBZ2 947 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 SAYSD1Q9NPB0 183 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 POMCP01189 267 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 TFE3P19532 575 aaPredicted RBP24.22■■□□□ 1.47
MSX2-201ENST00000239243 TIGD5Q53EQ6 642 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 PPP6R3Q5H9R7 873 aaPredicted RBP24.22■■□□□ 1.47
MSX2-201ENST00000239243 FAM71DQ8N9W8 422 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 PCDH19Q8TAB3 1148 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 DHX35Q9H5Z1 703 aaKnown RBP24.22■■□□□ 1.47
MSX2-201ENST00000239243 PRDM16Q9HAZ2 1276 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 CALCOCO1Q9P1Z2 691 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 H7C0C1 242 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 AP1G2O75843 785 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 BEST1O76090 585 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 IGFBP6P24592 240 aaPredicted RBP24.22■■□□□ 1.47
MSX2-201ENST00000239243 L1CAMP32004 1257 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 ATP5OP48047 213 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 SULT1E1P49888 294 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 MAP3K7CLP57077 242 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 CA9Q16790 459 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 NPNTQ6UXI9 565 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 PQLC3Q8N755 202 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 PCED1BQ96HM7 432 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 C9orf72Q96LT7 481 aa24.22■■□□□ 1.47
MSX2-201ENST00000239243 TDRD15B5MCY1 1934 aaKnown RBP24.21■■□□□ 1.47
MSX2-201ENST00000239243 PCNTO95613 3336 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.21■■□□□ 1.47
MSX2-201ENST00000239243 B3GAT3O94766 335 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 CYP11A1P05108 521 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 SLCO1A2P46721 670 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 TKTL1P51854 596 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 LONRF1Q17RB8 773 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 CCDC142Q17RM4 750 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 C1orf228Q6PIY5 440 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 ZC3H18Q86VM9 953 aaKnown RBP24.21■■□□□ 1.47
MSX2-201ENST00000239243 ECHDC2Q86YB7 292 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 BCAS4Q8TDM0 211 aa24.21■■□□□ 1.47
MSX2-201ENST00000239243 RCOR3Q9P2K3 495 aaPredicted RBP24.21■■□□□ 1.47
MSX2-201ENST00000239243 TIMM13Q9Y5L4 95 aaPredicted RBP24.21■■□□□ 1.47
MSX2-201ENST00000239243 A0A087WUV0 522 aaPredicted RBP24.2■■□□□ 1.47
MSX2-201ENST00000239243 TRPA1O75762 1119 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 CYP2F1P24903 491 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 HIF1AQ16665 826 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 DCAF6Q58WW2 860 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 NAT8LQ8N9F0 302 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 CPT1BQ92523 772 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 NT5C3BQ969T7 300 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 SMARCD1Q96GM5 515 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 ACBD6Q9BR61 282 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 PAAF1Q9BRP4 392 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 EPN3Q9H201 632 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 NRDE2Q9H7Z3 1164 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 C10orf88Q9H8K7 445 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 POPDC2Q9HBU9 364 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 CNGB3Q9NQW8 809 aa24.2■■□□□ 1.47
MSX2-201ENST00000239243 MYBPHLA2RUH7 354 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 INPPL1O15357 1258 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 MMP13P45452 471 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 NR2C2P49116 596 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 ARL4CP56559 192 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 SLC2A13Q96QE2 648 aa24.2■■□□□ 1.46
MSX2-201ENST00000239243 ALOX15BO15296 676 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 CKBP12277 381 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 HNRNPH2P55795 449 aaKnown RBP24.19■■□□□ 1.46
MSX2-201ENST00000239243 ZNF598Q86UK7 904 aaKnown RBP24.19■■□□□ 1.46
MSX2-201ENST00000239243 RIBC1Q8N443 379 aaPredicted RBP24.19■■□□□ 1.46
MSX2-201ENST00000239243 NPY6RQ99463 290 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 CREBZFQ9NS37 354 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 INPP5FQ9Y2H2 1132 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 HEY1Q9Y5J3 304 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 BCLAF3A2AJT9 711 aaKnown RBP24.19■■□□□ 1.46
MSX2-201ENST00000239243 CDH16O75309 829 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 ARL4AP40617 200 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 RTP4Q96DX8 246 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 ADAM33Q9BZ11 813 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 RGS18Q9NS28 235 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 PAK5Q9P286 719 aa24.19■■□□□ 1.46
MSX2-201ENST00000239243 M0QZQ0 153 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 EOMESO95936 686 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 ATXN1P54253 815 aaKnown RBP24.18■■□□□ 1.46
MSX2-201ENST00000239243 XRCC4Q13426 336 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 RAB41Q5JT25 222 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 C4orf22Q6V702 233 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 BNIPLQ7Z465 357 aa24.18■■□□□ 1.46
MSX2-201ENST00000239243 CDKL3Q8IVW4 592 aaPredicted RBP24.18■■□□□ 1.46
MSX2-201ENST00000239243 CENPTQ96BT3 561 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms