RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 AP4E1Q9UPM8 1137 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 PCDHA2Q9Y5H9 948 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 AK5Q9Y6K8 562 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DPPA5A6NC42 116 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 SRRM3A6NNA2 597 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 SNUPNO95149 360 aaKnown RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CLPTM1O96005 669 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CFHP08603 1231 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 ATXN8OSP0DMR3 200 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 NELFEP18615 380 aaKnown RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 MRC1P22897 1456 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CYP2F1P24903 491 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CCNA1P78396 465 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 LAMB3Q13751 1172 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 ZACNQ401N2 412 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 GSTCDQ8NEC7 633 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 HELQQ8TDG4 1101 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 NMRK1Q9NWW6 199 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CHKBQ9Y259 395 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 TIMM13Q9Y5L4 95 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 NID2Q14112 1375 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 TCRBV9S1A1TA0A576 114 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 C6orf222P0C671 652 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 RAG1P15918 1043 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 SLC1A6P48664 564 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 LACTB2Q53H82 288 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 ZC3H12AQ5D1E8 599 aaKnown RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 MTHFD1LQ6UB35 978 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 VSTM1Q6UX27 236 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 SLC9A9Q8IVB4 645 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 FAM193BQ96PV7 902 aaPredicted RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DRC3Q9H069 523 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DPP3Q9NY33 737 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 CD48P09326 243 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 TCF4P15884 667 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DPEP1P16444 411 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 ACAT1P24752 427 aaKnown RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 TRMT5Q32P41 509 aaKnown RBP14.2□□□□□ -0.14
NFKB1-201ENST00000226574 METTL23Q86XA0 190 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 STKLD1Q8NE28 680 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 GDPD5Q8WTR4 605 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 DNAJC5Q9H3Z4 198 aa14.2□□□□□ -0.14
NFKB1-201ENST00000226574 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 H0YGN5 161 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 SUPT7LO94864 414 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 CCNE2O96020 404 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 MYL3P08590 195 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 MUTP22033 750 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ARHGAP8P85298 464 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 NRF1Q16656 503 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 RIPOR1Q6ZS17 1223 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PIGWQ7Z7B1 504 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ZNF786Q8N393 782 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ALLCQ8N6M5 410 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PHF21BQ96EK2 531 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ZNF317Q96PQ6 595 aaPredicted RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 CDRT15Q96T59 188 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PRPF18Q99633 342 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 DCUN1D5Q9BTE7 237 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 SEMA6AQ9H2E6 1030 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 RUVBL2Q9Y230 463 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 NFS1Q9Y697 457 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 WNT10BO00744 389 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PHGDHO43175 533 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PAMP19021 973 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 FGFR3P22607 806 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 CLK2P49760 499 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 BACE1P56817 501 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 RFWD3Q6PCD5 774 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 DAW1Q8N136 415 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 SLC10A4Q96EP9 437 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 NR2E3Q9Y5X4 410 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 PEX6Q13608 980 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 OASLQ15646 514 aaKnown RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 FUT11Q495W5 492 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ANGPTL8Q6UXH0 198 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 ZNF572Q7Z3I7 529 aaPredicted RBP14.19□□□□□ -0.14
NFKB1-201ENST00000226574 APPL2Q8NEU8 664 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 SMARCAD1Q9H4L7 1026 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 COL20A1Q9P218 1284 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 STXBP5LQ9Y2K9 1186 aa14.19□□□□□ -0.14
NFKB1-201ENST00000226574 VWA5AO00534 786 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 GLRA3O75311 464 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 ETFBP38117 255 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 ACAP1Q15027 740 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 SPDYCQ5MJ68 293 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 SH3BP5LQ7L8J4 393 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 AP5M1Q9H0R1 490 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
NFKB1-201ENST00000226574 TMEM59LQ9UK28 342 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 IGLV3-22A0A075B6J6 115 aa14.18□□□□□ -0.14
NFKB1-201ENST00000226574 MICAL2O94851 1124 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms