RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NFKBIBQ15653 356 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 EML3Q32P44 896 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 PM20D1Q6GTS8 502 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 TXNDC11Q6PKC3 985 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 ZNF852Q6ZMS4 543 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 SIX6OS1Q8N1H7 587 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 FAM3CQ92520 227 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 PCMTD1Q96MG8 357 aaPredicted RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 KLF16Q9BXK1 252 aaPredicted RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 LTB4R2Q9NPC1 389 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 NLRC4Q9NPP4 1024 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 CYTH4Q9UIA0 394 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 NDRG2Q9UN36 371 aaKnown RBP13.32□□□□□ -0.28
LSM5-201ENST00000223084 SIT1Q9Y3P8 196 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 MIA3Q5JRA6 1907 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 ATG2BQ96BY7 2078 aa13.32□□□□□ -0.28
LSM5-201ENST00000223084 YJEFN3A6XGL0 299 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 E7ENQ6 273 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 SPECC1L-ADORA2AF8WAN1 911 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 TEX33O43247 280 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 CTHP32929 405 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 PSEN1P49768 467 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 DAOAP59103 153 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 PDGFRLQ15198 375 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
LSM5-201ENST00000223084 MIB1Q86YT6 1006 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 CCDC105Q8IYK2 499 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 EDEM1Q92611 657 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 HSFY1Q96LI6 401 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 STK33Q9BYT3 514 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 MIS12Q9H081 205 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 C8orf33Q9H7E9 229 aaPredicted RBP13.31□□□□□ -0.28
LSM5-201ENST00000223084 ECT2Q9H8V3 914 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 ST7Q9NRC1 585 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 SH3BP1Q9Y3L3 701 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 CACNA1IQ9P0X4 2223 aa13.31□□□□□ -0.28
LSM5-201ENST00000223084 FAM170AA1A519 330 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 F8VZ95 297 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 MAN2B1O00754 1011 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 EFEMP1Q12805 493 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 FZD5Q13467 585 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 PON2Q15165 354 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 TAF3Q5VWG9 929 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 BTBD8Q5XKL5 378 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 DDX42Q86XP3 938 aaKnown RBP eCLIP13.3□□□□□ -0.28
LSM5-201ENST00000223084 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 ARHGAP18Q8N392 663 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 WDTC1Q8N5D0 677 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 NEK11Q8NG66 645 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 ERGIC2Q96RQ1 377 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 CNGB3Q9NQW8 809 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 CLIC5Q9NZA1 410 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 DLGAP2Q9P1A6 1054 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 DNMT3LQ9UJW3 386 aa13.3□□□□□ -0.28
LSM5-201ENST00000223084 MRPS17Q9Y2R5 130 aaKnown RBP13.3□□□□□ -0.28
LSM5-201ENST00000223084 E2F8A0AVK6 867 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 GREM1O60565 184 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 GFPT2O94808 682 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 HMBSP08397 361 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 CYP11B1P15538 503 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 GJA4P35212 333 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 KRT9P35527 623 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 RPL34P49207 117 aaKnown RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 BPIFB4P59827 614 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 RSRC2Q7L4I2 434 aaKnown RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 TADA2BQ86TJ2 420 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 NOP9Q86U38 636 aaKnown RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 BBS7Q8IWZ6 715 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 ADGRG2Q8IZP9 1017 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 SCML4Q8N228 414 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 CPA6Q8N4T0 437 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 ZNF276Q8N554 614 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 C1orf131Q8NDD1 294 aaKnown RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 PRSS33Q8NF86 280 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 NAP1L5Q96NT1 182 aaPredicted RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 RBM12Q9NTZ6 932 aaKnown RBP13.29□□□□□ -0.28
LSM5-201ENST00000223084 SFMBT1Q9UHJ3 866 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
LSM5-201ENST00000223084 SLC12A8A0AV02 714 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 E5RJQ4 531 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 STC2O76061 302 aa13.28□□□□□ -0.28
LSM5-201ENST00000223084 FBXO21O94952 628 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms