RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 WWP1Q9H0M0 922 aa14.08□□□□□ -0.15
RAB3D-201ENST00000222120 DRG1Q9Y295 367 aaKnown RBP14.08□□□□□ -0.15
RAB3D-201ENST00000222120 C2orf71A6NGG8 1288 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 ITGAVP06756 1048 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 IL1R2P27930 398 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 ADIGQ0VDE8 80 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 PRPF39Q86UA1 669 aaKnown RBP14.08□□□□□ -0.16
RAB3D-201ENST00000222120 EDEM1Q92611 657 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 SRPK1Q96SB4 655 aaKnown RBP14.08□□□□□ -0.16
RAB3D-201ENST00000222120 SRRM3A6NNA2 597 aaPredicted RBP14.08□□□□□ -0.16
RAB3D-201ENST00000222120 GOLGA8TH3BQL2 631 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 ALOX15BO15296 676 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 SERPINB4P48594 390 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 TAF6P49848 677 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 AQP5P55064 265 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 MAP3K7CLP57077 242 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 GRAMD1BQ3KR37 738 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 FBXO47Q5MNV8 452 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 CPT1BQ92523 772 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 C18orf25Q96B23 403 aaPredicted RBP14.08□□□□□ -0.16
RAB3D-201ENST00000222120 SYT11Q9BT88 431 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 MECRQ9BV79 373 aa14.08□□□□□ -0.16
RAB3D-201ENST00000222120 PPP1R12AO14974 1030 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 MAP3K7O43318 606 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 RECQL4O94761 1208 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 POLE2P56282 527 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 KYAT1Q16773 422 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 SLC26A7Q8TE54 656 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 USP6NLQ92738 828 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 NSL1Q96IY1 281 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 CPA4Q9UI42 421 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PDHXO00330 501 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 CETPP11597 493 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 SKIP12755 728 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 FOXN2P32314 431 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 NCALDP61601 193 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PDK2Q15119 407 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 SGF29Q96ES7 293 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 GGA2Q9UJY4 613 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 UBQLN1Q9UMX0 589 aaKnown RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 DNAJC8O75937 253 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 MX2P20592 715 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 KCNA4P22459 653 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 ATICP31939 592 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 ZNF143P52747 638 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 SPRED3Q2MJR0 410 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 DEFB106AQ8N104 65 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 C2orf69Q8N8R5 385 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 COLGALT1Q8NBJ5 622 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 GBP5Q96PP8 586 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 ZNF317Q96PQ6 595 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 FSD1LQ9BXM9 530 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 HAPLN2Q9GZV7 340 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PPCSQ9HAB8 311 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 WDR27A2RRH5 827 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PMM2O15305 246 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 TPH1P17752 444 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 PAX7P23759 505 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 MPP2Q14168 576 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 RNF157Q96PX1 679 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 MRPL45Q9BRJ2 306 aaKnown RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
RAB3D-201ENST00000222120 SNCAIPQ9Y6H5 919 aa14.07□□□□□ -0.16
RAB3D-201ENST00000222120 TCRBV9S1A1TA0A576 114 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 CXCL11O14625 94 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 MLH1P40692 756 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 SLC6A3Q01959 620 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 TMEM63BQ5T3F8 832 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 RGS9BPQ6ZS82 235 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 ECHDC2Q86YB7 292 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 ITGA11Q9UKX5 1188 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 KIAA1551Q9HCM1 1747 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 TCRBV7S3A2A0A539 114 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 CYB561D2O14569 222 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 SPAG6O75602 509 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 CD4P01730 458 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 EPHX2P34913 555 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 WDR4P57081 412 aaKnown RBP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 ADGRF2Q8IZF7 708 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 LGMNQ99538 433 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 SPON1Q9HCB6 807 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 AAASQ9NRG9 546 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 C20orf96Q9NUD7 363 aaPredicted RBP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 KIAA1257Q9ULG3 409 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 FAM237BA0A1B0GVD1 139 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 AP1G2O75843 785 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 ATXN1P54253 815 aaKnown RBP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 RCN1Q15293 331 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 PCSK7Q16549 785 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 EFHC1Q5JVL4 640 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 GNASQ5JWF2 1037 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms