RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SLC2A14Q8TDB8 520 aa10.4□□□□□ -0.75
USP11-201ENST00000218348 FAM172AQ8WUF8 416 aa10.4□□□□□ -0.75
USP11-201ENST00000218348 ADAM7Q9H2U9 754 aa10.4□□□□□ -0.75
USP11-201ENST00000218348 OGDHLQ9ULD0 1010 aa10.4□□□□□ -0.75
USP11-201ENST00000218348 SMIM28A0A1B0GU29 152 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 EIF4E1BA6NMX2 242 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 CHUKO15111 745 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 DARSP14868 501 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 VCPP55072 806 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 ENPEPQ07075 957 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 MTFR1Q15390 333 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 CNGA2Q16280 664 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 ELAC2Q9BQ52 826 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 SLX1AQ9BQ83 275 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 ZNF518BQ9C0D4 1074 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 SUN2Q9UH99 717 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 DDX20Q9UHI6 824 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 CITO14578 2027 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 EXOC1LA0A1B0GW35 172 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 TMEM120BA0PK00 339 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 GABBR2O75899 941 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 PFKMP08237 780 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 PAEPP09466 180 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 NUDT17P0C025 328 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 GPD1P21695 349 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 GRM5P41594 1212 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 PURAQ00577 322 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 RHBDF2Q6PJF5 856 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 BEST2Q8NFU1 509 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 TRIM56Q9BRZ2 755 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 UNC93B1Q9H1C4 597 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 DHX35Q9H5Z1 703 aaKnown RBP10.39□□□□□ -0.75
USP11-201ENST00000218348 ITGA11Q9UKX5 1188 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 PPME1Q9Y570 386 aa10.39□□□□□ -0.75
USP11-201ENST00000218348 BRAFP15056 766 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 KRT15P19012 456 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 KLRC2P26717 231 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 GNL1P36915 607 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 PITX1P78337 314 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 PKN2Q16513 984 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 MFSD14CQ5VZR4 134 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 PYROXD2Q8N2H3 581 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 XPO6Q96QU8 1125 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 TRIM4Q9C037 500 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 SNX25Q9H3E2 840 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 MAGED2Q9UNF1 606 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 NAALADL1Q9UQQ1 740 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 INPP5FQ9Y2H2 1132 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 MFHAS1Q9Y4C4 1052 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 PAPSS1O43252 624 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 KIAA0754O94854 1291 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 TRUB2O95900 331 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 KRT7P08729 469 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 COL6A1P12109 1028 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 RPL22P35268 128 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 NDUFV1P49821 464 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 MPP2Q14168 576 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FAM187BQ17R55 369 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 C9orf57Q5W0N0 161 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 BSPRYQ5W0U4 402 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 C14orf80Q86SX3 495 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FAM131BQ86XD5 332 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 LRRC34Q8IZ02 419 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 ALLCQ8N6M5 410 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 KCNN1Q92952 543 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 TLCD1Q96CP7 247 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 RUNDC3BQ96NL0 473 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 IQCGQ9H095 443 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 LHX5Q9H2C1 402 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 ALG13Q9NP73 1137 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 CASTOR2A6NHX0 329 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 C3orf70A6NLC5 250 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 RTN3O95197 1032 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 SDC4P31431 198 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 NME3Q13232 169 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FSCN1Q16658 493 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 CCDC14Q49A88 953 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FBXO47Q5MNV8 452 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FNBP1LQ5T0N5 605 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 FAM47EQ6ZV65 393 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 APBB1IPQ7Z5R6 666 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 RAET1EQ8TD07 263 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 WNT8BQ93098 351 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 SNX27Q96L92 541 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 GAD1Q99259 594 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 PAAF1Q9BRP4 392 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 TACO1Q9BSH4 297 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 ASNSD1Q9NWL6 643 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
USP11-201ENST00000218348 CHMP2BQ9UQN3 213 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 C2CD2Q9Y426 696 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 NRCAMQ92823 1304 aa10.38□□□□□ -0.75
USP11-201ENST00000218348 KPNA7A9QM74 516 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms