RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 B3GNT5Q9BYG0 378 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 PIF1Q9H611 641 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 LRRC19Q9H756 370 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 SAE1Q9UBE0 346 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 WDR37Q9Y2I8 494 aa9.29□□□□□ -0.92
MTHFD1-201ENST00000216605 CCT8L1PA6NM43 557 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 PDLIM1O00151 329 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CST8O60676 142 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 MIPP30301 263 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 GBP1P32455 592 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CDH6P55285 790 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 ADCY1Q08828 1119 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 INCA1Q0VD86 236 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 TAF5Q15542 800 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 UBXN11Q5T124 520 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 HIBCHQ6NVY1 386 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 TMC3Q7Z5M5 1100 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 SMG8Q8ND04 991 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CCT6BQ92526 530 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CFAP57Q96MR6 1250 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 PAPOLBQ9NRJ5 636 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 BAIAP2L1Q9UHR4 511 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 USP18Q9UMW8 372 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 TRIP11Q15643 1979 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 SPTLC1O15269 473 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 LRCH4O75427 683 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 SCNN1GP51170 649 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 LILRA4P59901 499 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 PPP6R3Q5H9R7 873 aaPredicted RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 OLFML1Q6UWY5 402 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 HOOK3Q86VS8 718 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CCDC89Q8N998 374 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 PCSK9Q8NBP7 692 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 HASPINQ8TF76 798 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 WNT8BQ93098 351 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 GLT1D1Q96MS3 346 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 GORASP1Q9BQQ3 440 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 N6AMT1Q9Y5N5 214 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
MTHFD1-201ENST00000216605 CYP3A5P20815 502 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 ECHS1P30084 290 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 LMNB2Q03252 620 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 CUL3Q13618 768 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 SIX1Q15475 284 aaPredicted RBP9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 CCNG2Q16589 344 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 SH3PXD2AQ5TCZ1 1133 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 WSCD1Q658N2 575 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 UNC93AQ86WB7 457 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 RSAD2Q8WXG1 361 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 SNF8Q96H20 258 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 PIWIL1Q96J94 861 aaKnown RBP9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 C10orf88Q9H8K7 445 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 LRRC4Q9HBW1 653 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 SLC38A7Q9NVC3 462 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 UBAP1Q9NZ09 502 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 DNPEPQ9ULA0 475 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 PADI3Q9ULW8 664 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 SCN1AP35498 2009 aa9.27□□□□□ -0.92
MTHFD1-201ENST00000216605 CLDN5O00501 218 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ACSL3O95573 720 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CHRNA1P02708 482 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 GSTA1P08263 222 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 DRD4P21917 467 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 SLCO1A2P46721 670 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ITGA8P53708 1063 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ITGA7Q13683 1181 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ZBTB6Q15916 424 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CYP1B1Q16678 543 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CCDC63Q8NA47 563 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ADAM2Q99965 735 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 CNPY3Q9BT09 278 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 TMEM121Q9BTD3 319 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 YIPF3Q9GZM5 350 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 AGO3Q9H9G7 860 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 GPATCH2LQ9NWQ4 482 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 DNAH12Q6ZR08 3092 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 I3L4J1 428 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 PIRO00625 290 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 B3GAT3O94766 335 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 RPSAP08865 295 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ZSCAN5DPP0CG00 497 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 FGFR1P11362 822 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 IL1R2P27930 398 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ARSEP51690 589 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 BCAT1P54687 386 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ELF3P78545 371 aaPredicted RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 BST2Q10589 180 aaKnown RBP9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 GPS1Q13098 491 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 SLMAPQ14BN4 828 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 SPDYCQ5MJ68 293 aa9.27□□□□□ -0.93
MTHFD1-201ENST00000216605 ERMARDQ5T6L9 678 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms