RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 ATP11CQ8NB49 1132 aa27.13■■□□□ 1.93
RTN4R-201ENST00000043402 CCDC197Q8NCU1 140 aa27.13■■□□□ 1.93
RTN4R-201ENST00000043402 NDRG1Q92597 394 aaKnown RBP27.13■■□□□ 1.93
RTN4R-201ENST00000043402 MTMR10Q9NXD2 777 aa27.13■■□□□ 1.93
RTN4R-201ENST00000043402 WARSP23381 471 aaKnown RBP27.12■■□□□ 1.93
RTN4R-201ENST00000043402 ACAT1P24752 427 aaKnown RBP27.12■■□□□ 1.93
RTN4R-201ENST00000043402 TAF2Q6P1X5 1199 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 PIGZQ86VD9 579 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 IGDCC3Q8IVU1 814 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 TOP6BLQ8N6T0 577 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 RTP4Q96DX8 246 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 TNIP3Q96KP6 325 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 NCAPGQ9BPX3 1015 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 NRDE2Q9H7Z3 1164 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 SLC24A2Q9UI40 661 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 CLDN5O00501 218 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 BEST1O76090 585 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 DESP17661 470 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 CYP2F1P24903 491 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 ACADSBP45954 432 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 AFF1P51825 1210 aaKnown RBP27.12■■□□□ 1.93
RTN4R-201ENST00000043402 RNASELQ05823 741 aaKnown RBP27.12■■□□□ 1.93
RTN4R-201ENST00000043402 NR1H3Q13133 447 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 CCDC185Q8N715 623 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 GSTCDQ8NEC7 633 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 WNT8BQ93098 351 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 DHX35Q9H5Z1 703 aaKnown RBP27.12■■□□□ 1.93
RTN4R-201ENST00000043402 CDY2AQ9Y6F7 541 aa27.12■■□□□ 1.93
RTN4R-201ENST00000043402 DUSP11O75319 330 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 SPAG7O75391 227 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 RASA2Q15283 850 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 WSCD1Q658N2 575 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 ARHGEF18Q6ZSZ5 1173 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 CCDC121Q6ZUS5 278 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 PAQR9Q6ZVX9 377 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 SAPCD2Q86UD0 394 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 HNRNPABQ99729 332 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 FGFR1OP2Q9NVK5 253 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 CYB561D2O14569 222 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 XPO1O14980 1071 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 WDR4P57081 412 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 GEMIN4P57678 1058 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 MRPS6P82932 125 aaKnown RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 SLC10A2Q12908 348 aaPredicted RBP27.11■■□□□ 1.93
RTN4R-201ENST00000043402 GNASQ5JWF2 1037 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 FBF1Q8TES7 1133 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 TRABDQ9H4I3 376 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 NKIRAS1Q9NYS0 192 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 AP4E1Q9UPM8 1137 aa27.11■■□□□ 1.93
RTN4R-201ENST00000043402 BCLAF3A2AJT9 711 aaKnown RBP27.1■■□□□ 1.93
RTN4R-201ENST00000043402 FAM47DPA6NHR8 397 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 ZNF487B1APH4 448 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 KRT15P19012 456 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 STX2P32856 288 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 KIAA0319Q5VV43 1072 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 RGMBQ6NW40 437 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 CXCL17Q6UXB2 119 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 CCT6BQ92526 530 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 DUSP16Q9BY84 665 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 RAB6BQ9NRW1 208 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.1■■□□□ 1.93
RTN4R-201ENST00000043402 SAMD15Q9P1V8 674 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 PSMC3IPQ9P2W1 217 aaPredicted RBP27.1■■□□□ 1.93
RTN4R-201ENST00000043402 SCN10AQ9Y5Y9 1956 aa27.1■■□□□ 1.93
RTN4R-201ENST00000043402 A0A1W2PPM1 405 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 FSBPO95073 299 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 CPP00450 1065 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 PHBP35232 272 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 GBE1Q04446 702 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 ADIGQ0VDE8 80 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 CRHR2Q13324 411 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 PALM2Q8IXS6 379 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 KCTD15Q96SI1 283 aaPredicted RBP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 ACSS3Q9H6R3 686 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 PPCSQ9HAB8 311 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 PAK5Q9P286 719 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 GTF2IRD1Q9UHL9 959 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 ST3GAL5Q9UNP4 418 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 CHMP2BQ9UQN3 213 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 AVILO75366 819 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 ZBED1O96006 694 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 RARBP10826 455 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 PTPN1P18031 435 aaKnown RBP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 ELK3P41970 407 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 NBPF20Q3BBV1 942 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 TTC31Q49AM3 519 aaPredicted RBP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 GDF6Q6KF10 455 aaPredicted RBP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 C4orf33Q8N1A6 199 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 AGGF1Q8N302 714 aaeCLIP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 DHRS4Q9BTZ2 278 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 NSRP1Q9H0G5 558 aaKnown RBP27.09■■□□□ 1.93
RTN4R-201ENST00000043402 FETUBQ9UGM5 382 aa27.09■■□□□ 1.93
RTN4R-201ENST00000043402 GABRDO14764 452 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 CHADO15335 359 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 SNX3O60493 162 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 MLH1P40692 756 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 ITIH4Q14624 930 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 NUGGCQ68CJ6 796 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 PPP1R21Q6ZMI0 780 aa27.08■■□□□ 1.93
RTN4R-201ENST00000043402 DEFB106AQ8N104 65 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms