RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MYOZ2Q9NPC6 264 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 PLA2G4CQ9UP65 541 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 SPECC1L-ADORA2AF8WAN1 911 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 M0QYV0 167 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 ITM2AO43736 263 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 TOM1L1O75674 476 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 MICAL2O94851 1124 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 TMEM132AQ24JP5 1023 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 CYP4V2Q6ZWL3 525 aaPredicted RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 RXFP2Q8WXD0 754 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 TUBGCP5Q96RT8 1024 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 ACO2Q99798 780 aaKnown RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 WDR35Q9P2L0 1181 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 ZNF212Q9UDV6 495 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 KRT37O76014 449 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 CXCL8P10145 99 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 RGS7P49802 495 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 RAP1GDS1P52306 607 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 PEX6Q13608 980 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 CA9Q16790 459 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 RALGPS1Q5JS13 557 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 AP1ARQ63HQ0 302 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 UNC5AQ6ZN44 842 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 SLC4A11Q8NBS3 891 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 TRAPPC12Q8WVT3 735 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 PYDC1Q8WXC3 89 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 PPP1R16BQ96T49 567 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 MMADHCQ9H3L0 296 aaPredicted RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 TAGLN3Q9UI15 199 aa14.57□□□□□ -0.08
USH1C-201ENST00000005226 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
USH1C-201ENST00000005226 RGPD3A6NKT7 1758 aaPredicted RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 RGPD4Q7Z3J3 1758 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 ARHGAP42A6NI28 874 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 ABLIM1O14639 778 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 OGTO15294 1046 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 SNUPNO95149 360 aaKnown RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 PRKCBP05771 671 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 PDGFRAP16234 1089 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 CRADDP78560 199 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 TEX44Q53QW1 395 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 OR6B2Q6IFH4 312 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 RAPH1Q70E73 1250 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 RSPH3Q86UC2 560 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 PLD5Q8N7P1 536 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 FGD4Q96M96 766 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 CCDC106Q9BWC9 280 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 MRPL4Q9BYD3 311 aaKnown RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 TMEM134Q9H6X4 195 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 RSAD1Q9HA92 442 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 SIX4Q9UIU6 781 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 MAGEA13PA6NCF6 341 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 TM7SF2O76062 418 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 LYNP07948 512 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 OSBPP22059 807 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 IL4RP24394 825 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 BACE1P56817 501 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 PDE1BQ01064 536 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 KRT81Q14533 505 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 ATG14Q6ZNE5 492 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 CRLF3Q8IUI8 442 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 ADGRF2Q8IZF7 708 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 MTBPQ96DY7 904 aa14.56□□□□□ -0.08
USH1C-201ENST00000005226 HEXIM2Q96MH2 286 aaKnown RBP14.56□□□□□ -0.08
USH1C-201ENST00000005226 SLC15A5A6NIM6 579 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 MAGEC1O60732 1142 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 CIB2O75838 187 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 PDE5AO76074 875 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 METTL18O95568 372 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 NFICP08651 508 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 ADORA2AP29274 412 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 RAB27AP51159 221 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 STAT5BP51692 787 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 EPHB1P54762 984 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 RPL10AP62906 217 aaKnown RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 LAMTOR4Q0VGL1 99 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 PPP6R3Q5H9R7 873 aaPredicted RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 ANGEL2Q5VTE6 544 aaKnown RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 ISLR2Q6UXK2 745 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 DENND5BQ6ZUT9 1274 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 SAMD7Q7Z3H4 446 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 MYLK4Q86YV6 388 aaPredicted RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 CDHR1Q96JP9 859 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 NLRP4Q96MN2 994 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 ZNF778Q96MU6 729 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 RNF157Q96PX1 679 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 NGRNQ9NPE2 291 aaKnown RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 HBS1LQ9Y450 684 aaKnown RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 A8MXQ7 604 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 KLF11O14901 512 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 TNNC2P02585 160 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 KCNA4P22459 653 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 STX3Q13277 289 aa14.55□□□□□ -0.08
USH1C-201ENST00000005226 ZRSR2Q15696 482 aaKnown RBP14.55□□□□□ -0.08
USH1C-201ENST00000005226 ZNF667Q5HYK9 610 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms