RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	YAL065C	O13511	128 aa		0.78	□□□□□ -2.29
SKI3	YPR189W	YKL065W-A	Q2V2P2	73 aa		0.78	□□□□□ -2.29
SKI3	YPR189W	COX19	Q3E731	98 aa		0.78	□□□□□ -2.29
SKI3	YPR189W	DDR2	P89113	61 aa		0.77	□□□□□ -2.29
SKI3	YPR189W	YFL041W-A	Q3E817	63 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	QCR9	P22289	66 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	SPI1	P40092	148 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	YMR141C	P40211	102 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	YBR201C-A	Q2V2Q3	67 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	RPC10	P40422	70 aa		0.76	□□□□□ -2.29
SKI3	YPR189W	YDL022C-A	P0C5L6	82 aa		0.75	□□□□□ -2.29
SKI3	YPR189W	SSS1	P35179	80 aa		0.75	□□□□□ -2.29
SKI3	YPR189W	YHR213W-B	Q8TGK1	99 aa		0.75	□□□□□ -2.29
SKI3	YPR189W	YKL023C-A	Q2V2P3	75 aa		0.75	□□□□□ -2.29
SKI3	YPR189W	YNL198C	P40166	100 aa		0.74	□□□□□ -2.29
SKI3	YPR189W	YHR050W-A	Q05451	56 aa		0.74	□□□□□ -2.29
SKI3	YPR189W	YOR034C-A	Q3E735	80 aa		0.74	□□□□□ -2.29
SKI3	YPR189W	YLL066W-B	Q8TGJ7	56 aa		0.74	□□□□□ -2.29
SKI3	YPR189W	YLR342W-A	Q3E810	57 aa		0.73	□□□□□ -2.29
SKI3	YPR189W	ATP18	P81450	59 aa		0.73	□□□□□ -2.29
SKI3	YPR189W	YOL097W-A	Q3E7Y9	61 aa		0.73	□□□□□ -2.29
SKI3	YPR189W	YBR016W	P38216	128 aa		0.72	□□□□□ -2.29
SKI3	YPR189W	VMA9	Q3E7B6	73 aa		0.72	□□□□□ -2.29
SKI3	YPR189W	YBR072C-A	Q3E794	53 aa		0.71	□□□□□ -2.3
SKI3	YPR189W	YHR073W-A	P0C5N7	58 aa		0.71	□□□□□ -2.3
SKI3	YPR189W	PAU7	P39545	55 aa		0.71	□□□□□ -2.3
SKI3	YPR189W	RPL37A	P49166	88 aa	Known RBP	0.71	□□□□□ -2.3
SKI3	YPR189W	RPL37B	P51402	88 aa	Known RBP	0.71	□□□□□ -2.3
SKI3	YPR189W	YIL134C-A	Q45U18	67 aa		0.71	□□□□□ -2.3
SKI3	YPR189W	YNL190W	P53872	204 aa		0.7	□□□□□ -2.3
SKI3	YPR189W	YIL102C-A	Q2V2P5	75 aa		0.7	□□□□□ -2.3
SKI3	YPR189W	YOL166W-A	Q8TGJ1	51 aa		0.7	□□□□□ -2.3
SKI3	YPR189W	YSY6	P38374	65 aa		0.69	□□□□□ -2.3
SKI3	YPR189W	SDH6	Q3E785	79 aa		0.69	□□□□□ -2.3
SKI3	YPR189W	YJR107C-A	P0CT86	78 aa		0.69	□□□□□ -2.3
SKI3	YPR189W	ATP17	Q06405	101 aa		0.69	□□□□□ -2.3
SKI3	YPR189W	RPL38	P49167	78 aa	Known RBP	0.69	□□□□□ -2.3
SKI3	YPR189W	YPR108W-A	Q3E7B3	70 aa		0.68	□□□□□ -2.3
SKI3	YPR189W	YOR008C-A	Q3E7B9	74 aa		0.68	□□□□□ -2.3
SKI3	YPR189W	YJL133C-A	Q3E7A3	74 aa		0.68	□□□□□ -2.3
SKI3	YPR189W	YLR157W-E	P0CF00	54 aa		0.68	□□□□□ -2.3
SKI3	YPR189W	OLI1	P61829	76 aa		0.67	□□□□□ -2.3
SKI3	YPR189W	YOL164W-A	Q3E7A5	60 aa		0.66	□□□□□ -2.3
SKI3	YPR189W	YJL127C-B	Q3E828	52 aa		0.66	□□□□□ -2.3
SKI3	YPR189W	RPS30A	P0CX33	63 aa	Known RBP	0.66	□□□□□ -2.3
SKI3	YPR189W	RPS30B	P0CX34	63 aa	Known RBP	0.66	□□□□□ -2.3
SKI3	YPR189W	YLR146W-A	Q2V2P1	62 aa		0.66	□□□□□ -2.3
SKI3	YPR189W	EDC1	P53080	175 aa	Predicted RBP	0.65	□□□□□ -2.31
SKI3	YPR189W	YDR182W-A	Q3E796	67 aa		0.64	□□□□□ -2.31
SKI3	YPR189W	YBR200W-A	Q3E755	54 aa		0.64	□□□□□ -2.31
SKI3	YPR189W	HUB1	Q6Q546	73 aa		0.64	□□□□□ -2.31
SKI3	YPR189W	RPL29	P05747	59 aa	Predicted RBP	0.62	□□□□□ -2.31
SKI3	YPR189W	YFR009W-A	P0C5M9	85 aa		0.6	□□□□□ -2.31
SKI3	YPR189W	YLL006W-A	Q3E814	58 aa		0.59	□□□□□ -2.31
SKI3	YPR189W	YOR394C-A	Q8TGJ0	55 aa		0.59	□□□□□ -2.31
SKI3	YPR189W	YMR001C-A	Q8TGS9	76 aa		0.59	□□□□□ -2.31
SKI3	YPR189W	YBR230W-A	Q3E762	66 aa		0.58	□□□□□ -2.32
SKI3	YPR189W	YOR316C-A	Q3E806	69 aa		0.56	□□□□□ -2.32
SKI3	YPR189W	TOS6	P48560	102 aa		0.55	□□□□□ -2.32
SKI3	YPR189W	YBL044W	P38194	122 aa		0.55	□□□□□ -2.32
SKI3	YPR189W	YGR025W	P53216	100 aa		0.53	□□□□□ -2.32
SKI3	YPR189W	YCR108C	Q3E819	63 aa		0.5	□□□□□ -2.33
SKI3	YPR189W	YGR146C-A	Q8TGT9	53 aa		0.47	□□□□□ -2.33

Retrieved 63 of 5,963 RNA–protein pairs in 22.7 ms