RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W RPS27BP38711 82 aa2.66□□□□□ -1.98
TFB4YPR056W TOS6P48560 102 aa2.66□□□□□ -1.98
TFB4YPR056W YBR016WP38216 128 aa2.63□□□□□ -1.99
TFB4YPR056W YFR009W-AP0C5M9 85 aa2.61□□□□□ -1.99
TFB4YPR056W YBL044WP38194 122 aa2.6□□□□□ -1.99
TFB4YPR056W SIP18P50263 79 aa2.57□□□□□ -2
TFB4YPR056W YCR108CQ3E819 63 aa2.55□□□□□ -2
TFB4YPR056W RPL37BP51402 88 aaKnown RBP2.51□□□□□ -2.01
TFB4YPR056W YGR146C-AQ8TGT9 53 aa2.51□□□□□ -2.01
TFB4YPR056W SEN1Q00416 2231 aaKnown RBP2.51□□□□□ -2.01
TFB4YPR056W COA2Q3E823 68 aa2.45□□□□□ -2.02
TFB4YPR056W YLR342W-AQ3E810 57 aa2.42□□□□□ -2.02
TFB4YPR056W YOR008C-AQ3E7B9 74 aa2.39□□□□□ -2.03
TFB4YPR056W YJL133C-AQ3E7A3 74 aa2.34□□□□□ -2.03
TFB4YPR056W COX9P07255 59 aa2.31□□□□□ -2.04
TFB4YPR056W RPS29BP41058 56 aaKnown RBP2.27□□□□□ -2.05
TFB4YPR056W DDR2P89113 61 aa2.26□□□□□ -2.05
TFB4YPR056W TOM7P53507 60 aa2.2□□□□□ -2.06
TFB4YPR056W YLL006W-AQ3E814 58 aa2.2□□□□□ -2.06
TFB4YPR056W PRP8P33334 2413 aaKnown RBP2.17□□□□□ -2.06
TFB4YPR056W YDR524C-BQ3E6R4 66 aa2.17□□□□□ -2.06
TFB4YPR056W YOR316C-AQ3E806 69 aa2.17□□□□□ -2.06
TFB4YPR056W YOR072W-BQ3E832 53 aa2.15□□□□□ -2.07
TFB4YPR056W YGL258W-AQ3E740 77 aa2.1□□□□□ -2.07
TFB4YPR056W RPL29P05747 59 aaPredicted RBP2.08□□□□□ -2.08
TFB4YPR056W FLO1P32768 1537 aa2.05□□□□□ -2.08
TFB4YPR056W YJL127C-BQ3E828 52 aa2.04□□□□□ -2.08
TFB4YPR056W TAO3P40468 2376 aa2.01□□□□□ -2.09
TFB4YPR056W YDR034C-AP0C289 58 aa1.88□□□□□ -2.11
TFB4YPR056W YHR073W-AP0C5N7 58 aa1.88□□□□□ -2.11
TFB4YPR056W RPS29AP41057 56 aaKnown RBP1.87□□□□□ -2.11
TFB4YPR056W PMP3P87284 55 aa1.68□□□□□ -2.14
TFB4YPR056W HOR7Q05827 59 aa1.67□□□□□ -2.14
TFB4YPR056W NCE101Q02820 53 aa1.58□□□□□ -2.16
TFB4YPR056W TOR1P35169 2470 aa1.58□□□□□ -2.16
TFB4YPR056W UTP20P35194 2493 aaKnown RBP1.57□□□□□ -2.16
TFB4YPR056W YHR050W-AQ05451 56 aa1.55□□□□□ -2.16
TFB4YPR056W YML054C-AQ3E809 52 aa1.44□□□□□ -2.18
TFB4YPR056W Q0017Q9ZZX8 53 aa1.41□□□□□ -2.18
TFB4YPR056W MEC1P38111 2368 aa1.37□□□□□ -2.19
TFB4YPR056W TOR2P32600 2474 aaKnown RBP1.24□□□□□ -2.21
TFB4YPR056W DYN1P36022 4092 aa1.18□□□□□ -2.22
TFB4YPR056W TRA1P38811 3744 aa1.12□□□□□ -2.23
TFB4YPR056W FMP27Q06179 2628 aa1.11□□□□□ -2.23
TFB4YPR056W CSF1Q12150 2958 aa1.11□□□□□ -2.23
TFB4YPR056W YMR105W-AQ8TGS8 64 aa1.08□□□□□ -2.24
TFB4YPR056W GCN1P33892 2672 aaKnown RBP1.05□□□□□ -2.24
TFB4YPR056W YPR117WQ06116 2489 aa1.04□□□□□ -2.24
TFB4YPR056W YLL066W-BQ8TGJ7 56 aa1.03□□□□□ -2.24
TFB4YPR056W IRA1P18963 3092 aa0.98□□□□□ -2.25
TFB4YPR056W RPL39P04650 51 aa0.92□□□□□ -2.26
TFB4YPR056W TEL1P38110 2787 aa0.85□□□□□ -2.27
TFB4YPR056W IRA2P19158 3079 aa0.75□□□□□ -2.29
TFB4YPR056W NUM1Q00402 2748 aa0.73□□□□□ -2.29
TFB4YPR056W VPS13Q07878 3144 aa0.71□□□□□ -2.3
TFB4YPR056W CUP1-1P0CX80 61 aa0.63□□□□□ -2.31
TFB4YPR056W CUP1-2P0CX81 61 aa0.63□□□□□ -2.31
TFB4YPR056W YIL046W-AQ3E7Z4 54 aa0.59□□□□□ -2.31
TFB4YPR056W Q0297Q9ZZV8 51 aa0.46□□□□□ -2.34
TFB4YPR056W YBR056W-AI2HB52 66 aa0.35□□□□□ -2.35
TFB4YPR056W TOM1Q03280 3268 aa0.33□□□□□ -2.36
TFB4YPR056W YDR034W-BQ6Q5X2 51 aa0.32□□□□□ -2.36
TFB4YPR056W MDN1Q12019 4910 aaKnown RBP0.29□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 74.6 ms