RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YFR009W-AP0C5M9 85 aa0.67□□□□□ -2.3
PEP12YOR036W YBR016WP38216 128 aa0.67□□□□□ -2.3
PEP12YOR036W HUB1Q6Q546 73 aa0.67□□□□□ -2.3
PEP12YOR036W RPS27BP38711 82 aa0.66□□□□□ -2.3
PEP12YOR036W TOS6P48560 102 aa0.66□□□□□ -2.3
PEP12YOR036W YOR394C-AQ8TGJ0 55 aa0.65□□□□□ -2.31
PEP12YOR036W YGR025WP53216 100 aa0.64□□□□□ -2.31
PEP12YOR036W TOM7P53507 60 aa0.64□□□□□ -2.31
PEP12YOR036W YOR011W-AQ3E807 68 aa0.64□□□□□ -2.31
PEP12YOR036W COX9P07255 59 aa0.63□□□□□ -2.31
PEP12YOR036W YCR108CQ3E819 63 aa0.61□□□□□ -2.31
PEP12YOR036W YLR342W-AQ3E810 57 aa0.6□□□□□ -2.31
PEP12YOR036W YJL133C-AQ3E7A3 74 aa0.59□□□□□ -2.31
PEP12YOR036W YLL006W-AQ3E814 58 aa0.59□□□□□ -2.31
PEP12YOR036W TRA1P38811 3744 aa0.57□□□□□ -2.32
PEP12YOR036W YBL044WP38194 122 aa0.57□□□□□ -2.32
PEP12YOR036W YOR008C-AQ3E7B9 74 aa0.56□□□□□ -2.32
PEP12YOR036W OLI1P61829 76 aa0.55□□□□□ -2.32
PEP12YOR036W YBR230W-AQ3E762 66 aa0.55□□□□□ -2.32
PEP12YOR036W YGR146C-AQ8TGT9 53 aa0.55□□□□□ -2.32
PEP12YOR036W DYN1P36022 4092 aa0.54□□□□□ -2.32
PEP12YOR036W SIP18P50263 79 aa0.54□□□□□ -2.32
PEP12YOR036W DDR2P89113 61 aa0.53□□□□□ -2.32
PEP12YOR036W RPL29P05747 59 aaPredicted RBP0.52□□□□□ -2.33
PEP12YOR036W YJL127C-BQ3E828 52 aa0.52□□□□□ -2.33
PEP12YOR036W YGL258W-AQ3E740 77 aa0.51□□□□□ -2.33
PEP12YOR036W TAO3P40468 2376 aa0.5□□□□□ -2.33
PEP12YOR036W YOR316C-AQ3E806 69 aa0.49□□□□□ -2.33
PEP12YOR036W YHR073W-AP0C5N7 58 aa0.46□□□□□ -2.34
PEP12YOR036W NCE101Q02820 53 aa0.45□□□□□ -2.34
PEP12YOR036W CSF1Q12150 2958 aa0.43□□□□□ -2.34
PEP12YOR036W PMP3P87284 55 aa0.42□□□□□ -2.34
PEP12YOR036W YOR072W-BQ3E832 53 aa0.42□□□□□ -2.34
PEP12YOR036W YDR034C-AP0C289 58 aa0.41□□□□□ -2.34
PEP12YOR036W HOR7Q05827 59 aa0.41□□□□□ -2.34
PEP12YOR036W YDR524C-BQ3E6R4 66 aa0.41□□□□□ -2.34
PEP12YOR036W YMR105W-AQ8TGS8 64 aa0.4□□□□□ -2.35
PEP12YOR036W IRA2P19158 3079 aa0.4□□□□□ -2.35
PEP12YOR036W MEC1P38111 2368 aa0.38□□□□□ -2.35
PEP12YOR036W IRA1P18963 3092 aa0.38□□□□□ -2.35
PEP12YOR036W VPS13Q07878 3144 aa0.38□□□□□ -2.35
PEP12YOR036W RPL39P04650 51 aa0.37□□□□□ -2.35
PEP12YOR036W RPS29AP41057 56 aaKnown RBP0.36□□□□□ -2.35
PEP12YOR036W YLL066W-BQ8TGJ7 56 aa0.36□□□□□ -2.35
PEP12YOR036W TOM1Q03280 3268 aa0.36□□□□□ -2.35
PEP12YOR036W YIL046W-AQ3E7Z4 54 aa0.34□□□□□ -2.36
PEP12YOR036W GCN1P33892 2672 aaKnown RBP0.33□□□□□ -2.36
PEP12YOR036W UTP20P35194 2493 aaKnown RBP0.32□□□□□ -2.36
PEP12YOR036W NUM1Q00402 2748 aa0.32□□□□□ -2.36
PEP12YOR036W FMP27Q06179 2628 aa0.31□□□□□ -2.36
PEP12YOR036W YHR050W-AQ05451 56 aa0.28□□□□□ -2.36
PEP12YOR036W TOR2P32600 2474 aaKnown RBP0.28□□□□□ -2.36
PEP12YOR036W TEL1P38110 2787 aa0.28□□□□□ -2.37
PEP12YOR036W TOR1P35169 2470 aa0.27□□□□□ -2.37
PEP12YOR036W MDN1Q12019 4910 aaKnown RBP0.25□□□□□ -2.37
PEP12YOR036W Q0017Q9ZZX8 53 aa0.25□□□□□ -2.37
PEP12YOR036W YML054C-AQ3E809 52 aa0.24□□□□□ -2.37
PEP12YOR036W YPR117WQ06116 2489 aa0.24□□□□□ -2.37
PEP12YOR036W YBR056W-AI2HB52 66 aa0.14□□□□□ -2.39
PEP12YOR036W CUP1-1P0CX80 61 aa0.14□□□□□ -2.39
PEP12YOR036W CUP1-2P0CX81 61 aa0.14□□□□□ -2.39
PEP12YOR036W Q0297Q9ZZV8 51 aa0.14□□□□□ -2.39
PEP12YOR036W YDR034W-BQ6Q5X2 51 aa-0.02□□□□□ -2.41
Retrieved 63 of 5,963 RNA–protein pairs in 14.9 ms