RNA–Protein interactions for RNA: YLR197W

NOP56, Transcript of Essential evolutionarily-conserved nucleolar protein, yeastyeast

Gene NOP56, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP56YLR197W YOR011W-AQ3E807 68 aa1.03□□□□□ -2.24
NOP56YLR197W RPS27AP35997 82 aaKnown RBP1.01□□□□□ -2.25
NOP56YLR197W YGR025WP53216 100 aa1□□□□□ -2.25
NOP56YLR197W YOR394C-AQ8TGJ0 55 aa1□□□□□ -2.25
NOP56YLR197W YOR008C-AQ3E7B9 74 aa0.99□□□□□ -2.25
NOP56YLR197W RPC10P40422 70 aa0.99□□□□□ -2.25
NOP56YLR197W YLR342W-AQ3E810 57 aa0.99□□□□□ -2.25
NOP56YLR197W RPS27BP38711 82 aa0.98□□□□□ -2.25
NOP56YLR197W YJL133C-AQ3E7A3 74 aa0.96□□□□□ -2.26
NOP56YLR197W YLL006W-AQ3E814 58 aa0.96□□□□□ -2.26
NOP56YLR197W YBR230W-AQ3E762 66 aa0.95□□□□□ -2.26
NOP56YLR197W YCR108CQ3E819 63 aa0.95□□□□□ -2.26
NOP56YLR197W SIP18P50263 79 aa0.94□□□□□ -2.26
NOP56YLR197W OLI1P61829 76 aa0.94□□□□□ -2.26
NOP56YLR197W YGL258W-AQ3E740 77 aa0.94□□□□□ -2.26
NOP56YLR197W YBR016WP38216 128 aa0.93□□□□□ -2.26
NOP56YLR197W YOL164W-AQ3E7A5 60 aa0.93□□□□□ -2.26
NOP56YLR197W YBL044WP38194 122 aa0.92□□□□□ -2.26
NOP56YLR197W DDR2P89113 61 aa0.91□□□□□ -2.26
NOP56YLR197W PRP8P33334 2413 aaKnown RBP0.91□□□□□ -2.26
NOP56YLR197W RPL29P05747 59 aaPredicted RBP0.9□□□□□ -2.26
NOP56YLR197W YGR146C-AQ8TGT9 53 aa0.89□□□□□ -2.27
NOP56YLR197W YJL127C-BQ3E828 52 aa0.89□□□□□ -2.27
NOP56YLR197W RPS29BP41058 56 aaKnown RBP0.86□□□□□ -2.27
NOP56YLR197W NCE101Q02820 53 aa0.85□□□□□ -2.27
NOP56YLR197W YOR316C-AQ3E806 69 aa0.84□□□□□ -2.28
NOP56YLR197W TAO3P40468 2376 aa0.83□□□□□ -2.28
NOP56YLR197W PMP3P87284 55 aa0.81□□□□□ -2.28
NOP56YLR197W YHR073W-AP0C5N7 58 aa0.8□□□□□ -2.28
NOP56YLR197W HOR7Q05827 59 aa0.79□□□□□ -2.28
NOP56YLR197W YOR072W-BQ3E832 53 aa0.77□□□□□ -2.29
NOP56YLR197W YMR105W-AQ8TGS8 64 aa0.76□□□□□ -2.29
NOP56YLR197W YDR034C-AP0C289 58 aa0.75□□□□□ -2.29
NOP56YLR197W YDR524C-BQ3E6R4 66 aa0.75□□□□□ -2.29
NOP56YLR197W MEC1P38111 2368 aa0.75□□□□□ -2.29
NOP56YLR197W TRA1P38811 3744 aa0.72□□□□□ -2.29
NOP56YLR197W RPL39P04650 51 aa0.72□□□□□ -2.29
NOP56YLR197W VPS13Q07878 3144 aa0.69□□□□□ -2.3
NOP56YLR197W IRA2P19158 3079 aa0.68□□□□□ -2.3
NOP56YLR197W YLL066W-BQ8TGJ7 56 aa0.68□□□□□ -2.3
NOP56YLR197W CSF1Q12150 2958 aa0.67□□□□□ -2.3
NOP56YLR197W YIL046W-AQ3E7Z4 54 aa0.67□□□□□ -2.3
NOP56YLR197W TOM1Q03280 3268 aa0.67□□□□□ -2.3
NOP56YLR197W IRA1P18963 3092 aa0.64□□□□□ -2.31
NOP56YLR197W DYN1P36022 4092 aa0.64□□□□□ -2.31
NOP56YLR197W RPS29AP41057 56 aaKnown RBP0.6□□□□□ -2.31
NOP56YLR197W GCN1P33892 2672 aaKnown RBP0.6□□□□□ -2.31
NOP56YLR197W TOR1P35169 2470 aa0.59□□□□□ -2.32
NOP56YLR197W NUM1Q00402 2748 aa0.58□□□□□ -2.32
NOP56YLR197W FMP27Q06179 2628 aa0.57□□□□□ -2.32
NOP56YLR197W UTP20P35194 2493 aaKnown RBP0.57□□□□□ -2.32
NOP56YLR197W YHR050W-AQ05451 56 aa0.57□□□□□ -2.32
NOP56YLR197W YML054C-AQ3E809 52 aa0.57□□□□□ -2.32
NOP56YLR197W Q0017Q9ZZX8 53 aa0.56□□□□□ -2.32
NOP56YLR197W TOR2P32600 2474 aaKnown RBP0.54□□□□□ -2.32
NOP56YLR197W YBR056W-AI2HB52 66 aa0.54□□□□□ -2.32
NOP56YLR197W YPR117WQ06116 2489 aa0.51□□□□□ -2.33
NOP56YLR197W TEL1P38110 2787 aa0.51□□□□□ -2.33
NOP56YLR197W Q0297Q9ZZV8 51 aa0.42□□□□□ -2.34
NOP56YLR197W CUP1-1P0CX80 61 aa0.35□□□□□ -2.35
NOP56YLR197W CUP1-2P0CX81 61 aa0.35□□□□□ -2.35
NOP56YLR197W MDN1Q12019 4910 aaKnown RBP0.25□□□□□ -2.37
NOP56YLR197W YDR034W-BQ6Q5X2 51 aa0.2□□□□□ -2.38
Retrieved 63 of 5,963 RNA–protein pairs in 30.3 ms