RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W YPR010C-AA5Z2X5 72 aa2.98□□□□□ -1.93
ABF1YKL112W HOR7Q05827 59 aa2.98□□□□□ -1.93
ABF1YKL112W YFR009W-AP0C5M9 85 aa2.98□□□□□ -1.93
ABF1YKL112W YDR114CQ04597 100 aa2.98□□□□□ -1.93
ABF1YKL112W YOL013W-AP0C272 63 aaPredicted RBP2.97□□□□□ -1.93
ABF1YKL112W MVB12P42939 101 aa2.97□□□□□ -1.93
ABF1YKL112W YMR141CP40211 102 aa2.96□□□□□ -1.94
ABF1YKL112W YGR240C-AQ3E786 66 aa2.96□□□□□ -1.94
ABF1YKL112W YOR008C-AQ3E7B9 74 aa2.96□□□□□ -1.94
ABF1YKL112W YJR146WP47174 117 aa2.95□□□□□ -1.94
ABF1YKL112W Q0032Q9ZZX7 96 aa2.95□□□□□ -1.94
ABF1YKL112W YDL012CQ12489 107 aa2.95□□□□□ -1.94
ABF1YKL112W YBL039W-BP0C268 59 aa2.94□□□□□ -1.94
ABF1YKL112W YOL097W-AQ3E7Y9 61 aa2.94□□□□□ -1.94
ABF1YKL112W YEL008WP40001 126 aa2.93□□□□□ -1.94
ABF1YKL112W YOR072WQ08486 104 aa2.91□□□□□ -1.94
ABF1YKL112W RDS3Q06835 107 aaPredicted RBP2.9□□□□□ -1.94
ABF1YKL112W YBR200W-AQ3E755 54 aa2.9□□□□□ -1.94
ABF1YKL112W YNL162W-AQ3E7A8 72 aa2.9□□□□□ -1.94
ABF1YKL112W LCL1Q02786 101 aa2.88□□□□□ -1.95
ABF1YKL112W YGL258W-AQ3E740 77 aa2.86□□□□□ -1.95
ABF1YKL112W YOR011W-AQ3E807 68 aa2.86□□□□□ -1.95
ABF1YKL112W YLR342W-AQ3E810 57 aa2.86□□□□□ -1.95
ABF1YKL112W YGR025WP53216 100 aa2.84□□□□□ -1.96
ABF1YKL112W YJR128WP47162 119 aa2.83□□□□□ -1.96
ABF1YKL112W COX7P10174 60 aa2.81□□□□□ -1.96
ABF1YKL112W YMR230W-AQ3E7B5 62 aa2.81□□□□□ -1.96
ABF1YKL112W YHR213W-BQ8TGK1 99 aa2.8□□□□□ -1.96
ABF1YKL112W YLL006W-AQ3E814 58 aa2.8□□□□□ -1.96
ABF1YKL112W YJL009WP47078 108 aa2.79□□□□□ -1.96
ABF1YKL112W YOR394C-AQ8TGJ0 55 aa2.78□□□□□ -1.96
ABF1YKL112W YJL133C-AQ3E7A3 74 aa2.77□□□□□ -1.97
ABF1YKL112W YBR230W-AQ3E762 66 aa2.73□□□□□ -1.97
ABF1YKL112W YNL146C-AQ3E7Z1 64 aa2.73□□□□□ -1.97
ABF1YKL112W YAR064WP39563 99 aa2.72□□□□□ -1.97
ABF1YKL112W RPC10P40422 70 aa2.7□□□□□ -1.98
ABF1YKL112W YLR307C-AQ3E825 87 aa2.68□□□□□ -1.98
ABF1YKL112W RPL29P05747 59 aaPredicted RBP2.67□□□□□ -1.98
ABF1YKL112W YCR108CQ3E819 63 aa2.66□□□□□ -1.98
ABF1YKL112W OLI1P61829 76 aa2.65□□□□□ -1.99
ABF1YKL112W DDR2P89113 61 aa2.63□□□□□ -1.99
ABF1YKL112W YJL127C-BQ3E828 52 aa2.61□□□□□ -1.99
ABF1YKL112W YBL044WP38194 122 aa2.6□□□□□ -1.99
ABF1YKL112W RPL37BP51402 88 aaKnown RBP2.58□□□□□ -2
ABF1YKL112W YGR146C-AQ8TGT9 53 aa2.58□□□□□ -2
ABF1YKL112W YHR086W-AQ3E746 53 aa2.57□□□□□ -2
ABF1YKL112W YBR016WP38216 128 aa2.56□□□□□ -2
ABF1YKL112W YLL066W-BQ8TGJ7 56 aa2.55□□□□□ -2
ABF1YKL112W HHY1P39982 102 aa2.54□□□□□ -2
ABF1YKL112W PMP3P87284 55 aa2.53□□□□□ -2
ABF1YKL112W YBR072C-AQ3E794 53 aa2.53□□□□□ -2
ABF1YKL112W YDR034C-AP0C289 58 aa2.51□□□□□ -2.01
ABF1YKL112W YOR316C-AQ3E806 69 aa2.44□□□□□ -2.02
ABF1YKL112W YHR073W-AP0C5N7 58 aa2.34□□□□□ -2.03
ABF1YKL112W RPL37AP49166 88 aaKnown RBP2.3□□□□□ -2.04
ABF1YKL112W YOL164W-AQ3E7A5 60 aa2.27□□□□□ -2.05
ABF1YKL112W YOR072W-BQ3E832 53 aa2.25□□□□□ -2.05
ABF1YKL112W YLR157W-EP0CF00 54 aa2.16□□□□□ -2.06
ABF1YKL112W RPS29AP41057 56 aaKnown RBP2.02□□□□□ -2.09
ABF1YKL112W RPS29BP41058 56 aaKnown RBP1.95□□□□□ -2.1
ABF1YKL112W Q0017Q9ZZX8 53 aa1.94□□□□□ -2.1
ABF1YKL112W YML054C-AQ3E809 52 aa1.83□□□□□ -2.12
ABF1YKL112W YHR050W-AQ05451 56 aa1.69□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms