RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W ATG2P53855 1592 aa1.51□□□□□ -2.17
TFA1YKL028W RPS27BP38711 82 aa1.5□□□□□ -2.17
TFA1YKL028W YPR010C-AA5Z2X5 72 aa1.45□□□□□ -2.18
TFA1YKL028W VPS13Q07878 3144 aa1.45□□□□□ -2.18
TFA1YKL028W YOR008C-AQ3E7B9 74 aa1.44□□□□□ -2.18
TFA1YKL028W YPR117WQ06116 2489 aa1.44□□□□□ -2.18
TFA1YKL028W STU1P38198 1513 aa1.44□□□□□ -2.18
TFA1YKL028W TOR1P35169 2470 aa1.43□□□□□ -2.18
TFA1YKL028W YCR108CQ3E819 63 aa1.42□□□□□ -2.18
TFA1YKL028W YGR146C-AQ8TGT9 53 aa1.42□□□□□ -2.18
TFA1YKL028W BUD3P25558 1636 aa1.41□□□□□ -2.18
TFA1YKL028W NUP170P38181 1502 aa1.4□□□□□ -2.19
TFA1YKL028W TOS6P48560 102 aa1.4□□□□□ -2.19
TFA1YKL028W TEL1P38110 2787 aa1.36□□□□□ -2.19
TFA1YKL028W CHC1P22137 1653 aaKnown RBP1.33□□□□□ -2.2
TFA1YKL028W TAO3P40468 2376 aa1.32□□□□□ -2.2
TFA1YKL028W CUP1-1P0CX80 61 aa1.32□□□□□ -2.2
TFA1YKL028W CUP1-2P0CX81 61 aa1.32□□□□□ -2.2
TFA1YKL028W GCN1P33892 2672 aaKnown RBP1.3□□□□□ -2.2
TFA1YKL028W GCN2P15442 1659 aa1.28□□□□□ -2.2
TFA1YKL028W FIG2P25653 1609 aa1.26□□□□□ -2.21
TFA1YKL028W TOR2P32600 2474 aaKnown RBP1.24□□□□□ -2.21
TFA1YKL028W IRA2P19158 3079 aa1.23□□□□□ -2.21
TFA1YKL028W MLP2P40457 1679 aa1.23□□□□□ -2.21
TFA1YKL028W SMX2P40204 77 aaKnown RBP1.23□□□□□ -2.21
TFA1YKL028W COA2Q3E823 68 aa1.23□□□□□ -2.21
TFA1YKL028W IRA1P18963 3092 aa1.22□□□□□ -2.21
TFA1YKL028W YLL006W-AQ3E814 58 aa1.22□□□□□ -2.21
TFA1YKL028W YDR524C-BQ3E6R4 66 aa1.19□□□□□ -2.22
TFA1YKL028W FMP27Q06179 2628 aa1.19□□□□□ -2.22
TFA1YKL028W UTP20P35194 2493 aaKnown RBP1.18□□□□□ -2.22
TFA1YKL028W YGL258W-AQ3E740 77 aa1.17□□□□□ -2.22
TFA1YKL028W YOR072W-BQ3E832 53 aa1.15□□□□□ -2.22
TFA1YKL028W MDN1Q12019 4910 aaKnown RBP1.15□□□□□ -2.22
TFA1YKL028W TRA1P38811 3744 aa1.12□□□□□ -2.23
TFA1YKL028W RPS29AP41057 56 aaKnown RBP1.11□□□□□ -2.23
TFA1YKL028W YLR342W-AQ3E810 57 aa1.1□□□□□ -2.23
TFA1YKL028W YDR034W-BQ6Q5X2 51 aa1.1□□□□□ -2.23
TFA1YKL028W DYN1P36022 4092 aa1.1□□□□□ -2.23
TFA1YKL028W YJL133C-AQ3E7A3 74 aa1.08□□□□□ -2.24
TFA1YKL028W CSF1Q12150 2958 aa1.08□□□□□ -2.24
TFA1YKL028W COX9P07255 59 aa1.07□□□□□ -2.24
TFA1YKL028W YOR316C-AQ3E806 69 aa1.05□□□□□ -2.24
TFA1YKL028W DDR2P89113 61 aa1.02□□□□□ -2.25
TFA1YKL028W MEC1P38111 2368 aa0.95□□□□□ -2.26
TFA1YKL028W FLO1P32768 1537 aa0.94□□□□□ -2.26
TFA1YKL028W YDR034C-AP0C289 58 aa0.87□□□□□ -2.27
TFA1YKL028W YBR056W-AI2HB52 66 aa0.82□□□□□ -2.28
TFA1YKL028W YJL127C-BQ3E828 52 aa0.82□□□□□ -2.28
TFA1YKL028W RPL29P05747 59 aaPredicted RBP0.78□□□□□ -2.28
TFA1YKL028W YHR050W-AQ05451 56 aa0.78□□□□□ -2.28
TFA1YKL028W TOM7P53507 60 aa0.77□□□□□ -2.29
TFA1YKL028W YHR073W-AP0C5N7 58 aa0.75□□□□□ -2.29
TFA1YKL028W YIL046W-AQ3E7Z4 54 aa0.72□□□□□ -2.29
TFA1YKL028W Q0017Q9ZZX8 53 aa0.6□□□□□ -2.31
TFA1YKL028W YML054C-AQ3E809 52 aa0.59□□□□□ -2.31
TFA1YKL028W PMP3P87284 55 aa0.54□□□□□ -2.32
TFA1YKL028W Q0297Q9ZZV8 51 aa0.54□□□□□ -2.32
TFA1YKL028W HOR7Q05827 59 aa0.46□□□□□ -2.34
TFA1YKL028W NCE101Q02820 53 aa0.26□□□□□ -2.37
TFA1YKL028W RPL39P04650 51 aa0.18□□□□□ -2.38
TFA1YKL028W YMR105W-AQ8TGS8 64 aa0.13□□□□□ -2.39
TFA1YKL028W YLL066W-BQ8TGJ7 56 aa0.09□□□□□ -2.4
Retrieved 63 of 5,963 RNA–protein pairs in 12.9 ms