RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C YMR001C-AQ8TGS9 76 aa0.71□□□□□ -2.3
TRL1YJL087C SEN1Q00416 2231 aaKnown RBP0.7□□□□□ -2.3
TRL1YJL087C CUP1-1P0CX80 61 aa0.69□□□□□ -2.3
TRL1YJL087C CUP1-2P0CX81 61 aa0.69□□□□□ -2.3
TRL1YJL087C OLI1P61829 76 aa0.69□□□□□ -2.3
TRL1YJL087C YLR157W-DP0CE99 70 aa0.69□□□□□ -2.3
TRL1YJL087C RPS29BP41058 56 aaKnown RBP0.68□□□□□ -2.3
TRL1YJL087C YPR117WQ06116 2489 aa0.68□□□□□ -2.3
TRL1YJL087C YKL023C-AQ2V2P3 75 aa0.67□□□□□ -2.3
TRL1YJL087C YBL044WP38194 122 aa0.67□□□□□ -2.3
TRL1YJL087C TAO3P40468 2376 aa0.67□□□□□ -2.3
TRL1YJL087C YIL046W-AQ3E7Z4 54 aa0.66□□□□□ -2.3
TRL1YJL087C SIP18P50263 79 aa0.65□□□□□ -2.31
TRL1YJL087C TEL1P38110 2787 aa0.64□□□□□ -2.31
TRL1YJL087C YGR025WP53216 100 aa0.64□□□□□ -2.31
TRL1YJL087C YCR108CQ3E819 63 aa0.62□□□□□ -2.31
TRL1YJL087C TOR1P35169 2470 aa0.61□□□□□ -2.31
TRL1YJL087C YBR230W-AQ3E762 66 aa0.61□□□□□ -2.31
TRL1YJL087C RPS27BP38711 82 aa0.6□□□□□ -2.31
TRL1YJL087C TOR2P32600 2474 aaKnown RBP0.6□□□□□ -2.31
TRL1YJL087C DYN1P36022 4092 aa0.6□□□□□ -2.31
TRL1YJL087C NUM1Q00402 2748 aa0.6□□□□□ -2.31
TRL1YJL087C FMP27Q06179 2628 aa0.59□□□□□ -2.31
TRL1YJL087C YOR008C-AQ3E7B9 74 aa0.57□□□□□ -2.32
TRL1YJL087C TOS6P48560 102 aa0.57□□□□□ -2.32
TRL1YJL087C Q0297Q9ZZV8 51 aa0.57□□□□□ -2.32
TRL1YJL087C GCN1P33892 2672 aaKnown RBP0.56□□□□□ -2.32
TRL1YJL087C NCE101Q02820 53 aa0.56□□□□□ -2.32
TRL1YJL087C YGR146C-AQ8TGT9 53 aa0.56□□□□□ -2.32
TRL1YJL087C TOM1Q03280 3268 aa0.55□□□□□ -2.32
TRL1YJL087C SMX2P40204 77 aaKnown RBP0.55□□□□□ -2.32
TRL1YJL087C VPS13Q07878 3144 aa0.55□□□□□ -2.32
TRL1YJL087C YPR010C-AA5Z2X5 72 aa0.54□□□□□ -2.32
TRL1YJL087C MEC1P38111 2368 aa0.53□□□□□ -2.32
TRL1YJL087C COX9P07255 59 aa0.53□□□□□ -2.32
TRL1YJL087C CSF1Q12150 2958 aa0.53□□□□□ -2.32
TRL1YJL087C IRA1P18963 3092 aa0.5□□□□□ -2.33
TRL1YJL087C YMR105W-AQ8TGS8 64 aa0.49□□□□□ -2.33
TRL1YJL087C YLL006W-AQ3E814 58 aa0.48□□□□□ -2.33
TRL1YJL087C HOR7Q05827 59 aa0.48□□□□□ -2.33
TRL1YJL087C UTP20P35194 2493 aaKnown RBP0.48□□□□□ -2.33
TRL1YJL087C MDN1Q12019 4910 aaKnown RBP0.47□□□□□ -2.33
TRL1YJL087C RPL39P04650 51 aa0.47□□□□□ -2.33
TRL1YJL087C TRA1P38811 3744 aa0.46□□□□□ -2.34
TRL1YJL087C YGL258W-AQ3E740 77 aa0.46□□□□□ -2.34
TRL1YJL087C IRA2P19158 3079 aa0.46□□□□□ -2.34
TRL1YJL087C COA2Q3E823 68 aa0.44□□□□□ -2.34
TRL1YJL087C YLR342W-AQ3E810 57 aa0.43□□□□□ -2.34
TRL1YJL087C YLL066W-BQ8TGJ7 56 aa0.43□□□□□ -2.34
TRL1YJL087C RPS29AP41057 56 aaKnown RBP0.43□□□□□ -2.34
TRL1YJL087C YOR072W-BQ3E832 53 aa0.42□□□□□ -2.34
TRL1YJL087C RPL29P05747 59 aaPredicted RBP0.39□□□□□ -2.35
TRL1YJL087C PMP3P87284 55 aa0.39□□□□□ -2.35
TRL1YJL087C YDR034C-AP0C289 58 aa0.38□□□□□ -2.35
TRL1YJL087C TOM7P53507 60 aa0.38□□□□□ -2.35
TRL1YJL087C YJL133C-AQ3E7A3 74 aa0.36□□□□□ -2.35
TRL1YJL087C YOR316C-AQ3E806 69 aa0.35□□□□□ -2.35
TRL1YJL087C Q0017Q9ZZX8 53 aa0.34□□□□□ -2.36
TRL1YJL087C YHR073W-AP0C5N7 58 aa0.33□□□□□ -2.36
TRL1YJL087C DDR2P89113 61 aa0.31□□□□□ -2.36
TRL1YJL087C YJL127C-BQ3E828 52 aa0.31□□□□□ -2.36
TRL1YJL087C YML054C-AQ3E809 52 aa0.27□□□□□ -2.37
TRL1YJL087C YHR050W-AQ05451 56 aa0.25□□□□□ -2.37
Retrieved 63 of 5,963 RNA–protein pairs in 33.5 ms