RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C YBL044WP38194 122 aa0.77□□□□□ -2.29
RTT101YJL047C RPS27BP38711 82 aa0.77□□□□□ -2.29
RTT101YJL047C YGR025WP53216 100 aa0.77□□□□□ -2.29
RTT101YJL047C YPR010C-AA5Z2X5 72 aa0.75□□□□□ -2.29
RTT101YJL047C SMX2P40204 77 aaKnown RBP0.74□□□□□ -2.29
RTT101YJL047C YBR230W-AQ3E762 66 aa0.73□□□□□ -2.29
RTT101YJL047C GCN2P15442 1659 aa0.73□□□□□ -2.29
RTT101YJL047C SIP18P50263 79 aa0.72□□□□□ -2.29
RTT101YJL047C YCR108CQ3E819 63 aa0.72□□□□□ -2.29
RTT101YJL047C PRP8P33334 2413 aaKnown RBP0.71□□□□□ -2.3
RTT101YJL047C YGR146C-AQ8TGT9 53 aa0.68□□□□□ -2.3
RTT101YJL047C RPS29BP41058 56 aaKnown RBP0.68□□□□□ -2.3
RTT101YJL047C TOS6P48560 102 aa0.66□□□□□ -2.3
RTT101YJL047C YOR008C-AQ3E7B9 74 aa0.64□□□□□ -2.31
RTT101YJL047C TAO3P40468 2376 aa0.62□□□□□ -2.31
RTT101YJL047C YLL006W-AQ3E814 58 aa0.59□□□□□ -2.32
RTT101YJL047C YLR342W-AQ3E810 57 aa0.58□□□□□ -2.32
RTT101YJL047C YJL133C-AQ3E7A3 74 aa0.57□□□□□ -2.32
RTT101YJL047C COA2Q3E823 68 aa0.55□□□□□ -2.32
RTT101YJL047C YDR524C-BQ3E6R4 66 aa0.54□□□□□ -2.32
RTT101YJL047C YOR072W-BQ3E832 53 aa0.53□□□□□ -2.32
RTT101YJL047C YGL258W-AQ3E740 77 aa0.53□□□□□ -2.33
RTT101YJL047C DDR2P89113 61 aa0.52□□□□□ -2.33
RTT101YJL047C FLO1P32768 1537 aa0.51□□□□□ -2.33
RTT101YJL047C YOR316C-AQ3E806 69 aa0.51□□□□□ -2.33
RTT101YJL047C COX9P07255 59 aa0.49□□□□□ -2.33
RTT101YJL047C TOM7P53507 60 aa0.49□□□□□ -2.33
RTT101YJL047C RPS29AP41057 56 aaKnown RBP0.48□□□□□ -2.33
RTT101YJL047C YJL127C-BQ3E828 52 aa0.45□□□□□ -2.34
RTT101YJL047C TOR1P35169 2470 aa0.44□□□□□ -2.34
RTT101YJL047C UTP20P35194 2493 aaKnown RBP0.44□□□□□ -2.34
RTT101YJL047C YDR034C-AP0C289 58 aa0.43□□□□□ -2.34
RTT101YJL047C RPL29P05747 59 aaPredicted RBP0.42□□□□□ -2.34
RTT101YJL047C MDN1Q12019 4910 aaKnown RBP0.41□□□□□ -2.34
RTT101YJL047C YHR073W-AP0C5N7 58 aa0.39□□□□□ -2.35
RTT101YJL047C YHR050W-AQ05451 56 aa0.35□□□□□ -2.35
RTT101YJL047C TOR2P32600 2474 aaKnown RBP0.31□□□□□ -2.36
RTT101YJL047C MEC1P38111 2368 aa0.29□□□□□ -2.36
RTT101YJL047C PMP3P87284 55 aa0.27□□□□□ -2.37
RTT101YJL047C Q0017Q9ZZX8 53 aa0.27□□□□□ -2.37
RTT101YJL047C FMP27Q06179 2628 aa0.26□□□□□ -2.37
RTT101YJL047C HOR7Q05827 59 aa0.26□□□□□ -2.37
RTT101YJL047C YML054C-AQ3E809 52 aa0.25□□□□□ -2.37
RTT101YJL047C TRA1P38811 3744 aa0.25□□□□□ -2.37
RTT101YJL047C YPR117WQ06116 2489 aa0.25□□□□□ -2.37
RTT101YJL047C CSF1Q12150 2958 aa0.24□□□□□ -2.37
RTT101YJL047C DYN1P36022 4092 aa0.23□□□□□ -2.37
RTT101YJL047C GCN1P33892 2672 aaKnown RBP0.21□□□□□ -2.38
RTT101YJL047C NCE101Q02820 53 aa0.21□□□□□ -2.38
RTT101YJL047C CUP1-1P0CX80 61 aa0.19□□□□□ -2.38
RTT101YJL047C CUP1-2P0CX81 61 aa0.19□□□□□ -2.38
RTT101YJL047C IRA1P18963 3092 aa0.16□□□□□ -2.38
RTT101YJL047C NUM1Q00402 2748 aa0.15□□□□□ -2.39
RTT101YJL047C TEL1P38110 2787 aa0.14□□□□□ -2.39
RTT101YJL047C IRA2P19158 3079 aa0.08□□□□□ -2.4
RTT101YJL047C YLL066W-BQ8TGJ7 56 aa0.06□□□□□ -2.4
RTT101YJL047C VPS13Q07878 3144 aa0.06□□□□□ -2.4
RTT101YJL047C YMR105W-AQ8TGS8 64 aa0.03□□□□□ -2.4
RTT101YJL047C RPL39P04650 51 aa-0.02□□□□□ -2.41
RTT101YJL047C TOM1Q03280 3268 aa-0.19□□□□□ -2.44
RTT101YJL047C YIL046W-AQ3E7Z4 54 aa-0.2□□□□□ -2.44
RTT101YJL047C YDR034W-BQ6Q5X2 51 aa-0.24□□□□□ -2.45
RTT101YJL047C Q0297Q9ZZV8 51 aa-0.39□□□□□ -2.47
Retrieved 63 of 5,963 RNA–protein pairs in 5.9 ms