RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W YDR524C-BQ3E6R4 66 aa0.48□□□□□ -2.33
CIC1YHR052W YGR146C-AQ8TGT9 53 aa0.48□□□□□ -2.33
CIC1YHR052W HIR3P47171 1648 aa0.48□□□□□ -2.33
CIC1YHR052W PEP1P32319 1579 aa0.48□□□□□ -2.33
CIC1YHR052W BPH1P25356 2167 aa0.47□□□□□ -2.33
CIC1YHR052W YPR010C-AA5Z2X5 72 aa0.47□□□□□ -2.33
CIC1YHR052W YOR192C-CQ3E736 78 aa0.47□□□□□ -2.33
CIC1YHR052W YOR072W-BQ3E832 53 aa0.47□□□□□ -2.33
CIC1YHR052W PRP8P33334 2413 aaKnown RBP0.47□□□□□ -2.33
CIC1YHR052W GCN2P15442 1659 aa0.44□□□□□ -2.34
CIC1YHR052W COX9P07255 59 aa0.44□□□□□ -2.34
CIC1YHR052W RPS27BP38711 82 aa0.44□□□□□ -2.34
CIC1YHR052W RPS29AP41057 56 aaKnown RBP0.44□□□□□ -2.34
CIC1YHR052W YLL006W-AQ3E814 58 aa0.44□□□□□ -2.34
CIC1YHR052W ATG2P53855 1592 aa0.41□□□□□ -2.34
CIC1YHR052W YOR316C-AQ3E806 69 aa0.39□□□□□ -2.35
CIC1YHR052W MLP2P40457 1679 aa0.39□□□□□ -2.35
CIC1YHR052W SEN1Q00416 2231 aaKnown RBP0.38□□□□□ -2.35
CIC1YHR052W YLR342W-AQ3E810 57 aa0.38□□□□□ -2.35
CIC1YHR052W DDR2P89113 61 aa0.37□□□□□ -2.35
CIC1YHR052W YJL133C-AQ3E7A3 74 aa0.37□□□□□ -2.35
CIC1YHR052W FIG2P25653 1609 aa0.37□□□□□ -2.35
CIC1YHR052W SMX2P40204 77 aaKnown RBP0.36□□□□□ -2.35
CIC1YHR052W YHR050W-AQ05451 56 aa0.36□□□□□ -2.35
CIC1YHR052W TAO3P40468 2376 aa0.35□□□□□ -2.35
CIC1YHR052W CHC1P22137 1653 aaKnown RBP0.34□□□□□ -2.35
CIC1YHR052W YDR034C-AP0C289 58 aa0.34□□□□□ -2.36
CIC1YHR052W FLO1P32768 1537 aa0.33□□□□□ -2.36
CIC1YHR052W RPL29P05747 59 aaPredicted RBP0.31□□□□□ -2.36
CIC1YHR052W YJL127C-BQ3E828 52 aa0.31□□□□□ -2.36
CIC1YHR052W YML054C-AQ3E809 52 aa0.3□□□□□ -2.36
CIC1YHR052W YHR073W-AP0C5N7 58 aa0.28□□□□□ -2.36
CIC1YHR052W PMP3P87284 55 aa0.28□□□□□ -2.36
CIC1YHR052W Q0017Q9ZZX8 53 aa0.28□□□□□ -2.36
CIC1YHR052W UTP20P35194 2493 aaKnown RBP0.24□□□□□ -2.37
CIC1YHR052W TOR1P35169 2470 aa0.23□□□□□ -2.37
CIC1YHR052W TOM7P53507 60 aa0.22□□□□□ -2.37
CIC1YHR052W HOR7Q05827 59 aa0.22□□□□□ -2.37
CIC1YHR052W YMR105W-AQ8TGS8 64 aa0.2□□□□□ -2.38
CIC1YHR052W TOR2P32600 2474 aaKnown RBP0.15□□□□□ -2.39
CIC1YHR052W MEC1P38111 2368 aa0.11□□□□□ -2.39
CIC1YHR052W NCE101Q02820 53 aa0.11□□□□□ -2.39
CIC1YHR052W FMP27Q06179 2628 aa0.11□□□□□ -2.39
CIC1YHR052W YPR117WQ06116 2489 aa0.1□□□□□ -2.39
CIC1YHR052W CUP1-1P0CX80 61 aa0.05□□□□□ -2.4
CIC1YHR052W CUP1-2P0CX81 61 aa0.05□□□□□ -2.4
CIC1YHR052W IRA1P18963 3092 aa0.04□□□□□ -2.4
CIC1YHR052W CSF1Q12150 2958 aa0.04□□□□□ -2.4
CIC1YHR052W YLL066W-BQ8TGJ7 56 aa0.03□□□□□ -2.4
CIC1YHR052W TRA1P38811 3744 aa0.03□□□□□ -2.41
CIC1YHR052W DYN1P36022 4092 aa0.02□□□□□ -2.41
CIC1YHR052W GCN1P33892 2672 aaKnown RBP0.02□□□□□ -2.41
CIC1YHR052W TEL1P38110 2787 aa0.02□□□□□ -2.41
CIC1YHR052W IRA2P19158 3079 aa-0.03□□□□□ -2.41
CIC1YHR052W VPS13Q07878 3144 aa-0.04□□□□□ -2.42
CIC1YHR052W NUM1Q00402 2748 aa-0.06□□□□□ -2.42
CIC1YHR052W RPL39P04650 51 aa-0.07□□□□□ -2.42
CIC1YHR052W YBR056W-AI2HB52 66 aa-0.09□□□□□ -2.42
CIC1YHR052W MDN1Q12019 4910 aaKnown RBP-0.12□□□□□ -2.43
CIC1YHR052W TOM1Q03280 3268 aa-0.22□□□□□ -2.44
CIC1YHR052W YIL046W-AQ3E7Z4 54 aa-0.28□□□□□ -2.45
CIC1YHR052W Q0297Q9ZZV8 51 aa-0.29□□□□□ -2.46
CIC1YHR052W YDR034W-BQ6Q5X2 51 aa-0.79□□□□□ -2.54
Retrieved 63 of 5,963 RNA–protein pairs in 9.1 ms