RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	YBR230W-A	Q3E762	66 aa		1.04	□□□□□ -2.24
VMA10	YHR039C-A	RPL43A	P0CX25	92 aa	Known RBP	1.03	□□□□□ -2.24
VMA10	YHR039C-A	RPL43B	P0CX26	92 aa		1.03	□□□□□ -2.24
VMA10	YHR039C-A	RPS27B	P38711	82 aa		1.03	□□□□□ -2.24
VMA10	YHR039C-A	FLO1	P32768	1537 aa		1.02	□□□□□ -2.25
VMA10	YHR039C-A	YLR342W-A	Q3E810	57 aa		1.02	□□□□□ -2.25
VMA10	YHR039C-A	SIP18	P50263	79 aa		1.01	□□□□□ -2.25
VMA10	YHR039C-A	TOM7	P53507	60 aa		1.01	□□□□□ -2.25
VMA10	YHR039C-A	YBL044W	P38194	122 aa		1	□□□□□ -2.25
VMA10	YHR039C-A	YJL133C-A	Q3E7A3	74 aa		1	□□□□□ -2.25
VMA10	YHR039C-A	YOR008C-A	Q3E7B9	74 aa		1	□□□□□ -2.25
VMA10	YHR039C-A	YCR108C	Q3E819	63 aa		1	□□□□□ -2.25
VMA10	YHR039C-A	YBR016W	P38216	128 aa		0.98	□□□□□ -2.25
VMA10	YHR039C-A	YLL006W-A	Q3E814	58 aa		0.97	□□□□□ -2.25
VMA10	YHR039C-A	YLR307C-A	Q3E825	87 aa		0.97	□□□□□ -2.25
VMA10	YHR039C-A	YGR146C-A	Q8TGT9	53 aa		0.97	□□□□□ -2.25
VMA10	YHR039C-A	YLR157W-E	P0CF00	54 aa		0.95	□□□□□ -2.26
VMA10	YHR039C-A	DDR2	P89113	61 aa		0.95	□□□□□ -2.26
VMA10	YHR039C-A	YOL164W-A	Q3E7A5	60 aa		0.95	□□□□□ -2.26
VMA10	YHR039C-A	RPL29	P05747	59 aa	Predicted RBP	0.91	□□□□□ -2.26
VMA10	YHR039C-A	YJL127C-B	Q3E828	52 aa		0.91	□□□□□ -2.26
VMA10	YHR039C-A	YGL258W-A	Q3E740	77 aa		0.9	□□□□□ -2.27
VMA10	YHR039C-A	YOR316C-A	Q3E806	69 aa		0.89	□□□□□ -2.27
VMA10	YHR039C-A	TAO3	P40468	2376 aa		0.88	□□□□□ -2.27
VMA10	YHR039C-A	YOR072W-B	Q3E832	53 aa		0.86	□□□□□ -2.27
VMA10	YHR039C-A	YDR524C-B	Q3E6R4	66 aa		0.84	□□□□□ -2.27
VMA10	YHR039C-A	YHR073W-A	P0C5N7	58 aa		0.83	□□□□□ -2.28
VMA10	YHR039C-A	PMP3	P87284	55 aa		0.81	□□□□□ -2.28
VMA10	YHR039C-A	NCE101	Q02820	53 aa		0.8	□□□□□ -2.28
VMA10	YHR039C-A	YDR034C-A	P0C289	58 aa		0.79	□□□□□ -2.28
VMA10	YHR039C-A	HOR7	Q05827	59 aa		0.79	□□□□□ -2.28
VMA10	YHR039C-A	RPS29B	P41058	56 aa	Known RBP	0.78	□□□□□ -2.28
VMA10	YHR039C-A	PRP8	P33334	2413 aa	Known RBP	0.77	□□□□□ -2.29
VMA10	YHR039C-A	MEC1	P38111	2368 aa		0.73	□□□□□ -2.29
VMA10	YHR039C-A	RPS29A	P41057	56 aa	Known RBP	0.7	□□□□□ -2.3
VMA10	YHR039C-A	YMR105W-A	Q8TGS8	64 aa		0.65	□□□□□ -2.31
VMA10	YHR039C-A	TOR1	P35169	2470 aa		0.64	□□□□□ -2.31
VMA10	YHR039C-A	RPL39	P04650	51 aa		0.63	□□□□□ -2.31
VMA10	YHR039C-A	YHR050W-A	Q05451	56 aa		0.63	□□□□□ -2.31
VMA10	YHR039C-A	TRA1	P38811	3744 aa		0.63	□□□□□ -2.31
VMA10	YHR039C-A	YML054C-A	Q3E809	52 aa		0.61	□□□□□ -2.31
VMA10	YHR039C-A	Q0017	Q9ZZX8	53 aa		0.6	□□□□□ -2.31
VMA10	YHR039C-A	UTP20	P35194	2493 aa	Known RBP	0.59	□□□□□ -2.31
VMA10	YHR039C-A	YLL066W-B	Q8TGJ7	56 aa		0.59	□□□□□ -2.31
VMA10	YHR039C-A	DYN1	P36022	4092 aa		0.56	□□□□□ -2.32
VMA10	YHR039C-A	TOR2	P32600	2474 aa	Known RBP	0.56	□□□□□ -2.32
VMA10	YHR039C-A	CSF1	Q12150	2958 aa		0.51	□□□□□ -2.33
VMA10	YHR039C-A	YIL046W-A	Q3E7Z4	54 aa		0.5	□□□□□ -2.33
VMA10	YHR039C-A	YPR117W	Q06116	2489 aa		0.47	□□□□□ -2.33
VMA10	YHR039C-A	IRA2	P19158	3079 aa		0.46	□□□□□ -2.34
VMA10	YHR039C-A	GCN1	P33892	2672 aa	Known RBP	0.46	□□□□□ -2.34
VMA10	YHR039C-A	IRA1	P18963	3092 aa		0.46	□□□□□ -2.34
VMA10	YHR039C-A	FMP27	Q06179	2628 aa		0.44	□□□□□ -2.34
VMA10	YHR039C-A	TEL1	P38110	2787 aa		0.4	□□□□□ -2.34
VMA10	YHR039C-A	NUM1	Q00402	2748 aa		0.4	□□□□□ -2.35
VMA10	YHR039C-A	VPS13	Q07878	3144 aa		0.39	□□□□□ -2.35
VMA10	YHR039C-A	TOM1	Q03280	3268 aa		0.34	□□□□□ -2.36
VMA10	YHR039C-A	CUP1-1	P0CX80	61 aa		0.33	□□□□□ -2.36
VMA10	YHR039C-A	CUP1-2	P0CX81	61 aa		0.33	□□□□□ -2.36
VMA10	YHR039C-A	Q0297	Q9ZZV8	51 aa		0.28	□□□□□ -2.36
VMA10	YHR039C-A	MDN1	Q12019	4910 aa	Known RBP	0.19	□□□□□ -2.38
VMA10	YHR039C-A	YBR056W-A	I2HB52	66 aa		0.19	□□□□□ -2.38
VMA10	YHR039C-A	YDR034W-B	Q6Q5X2	51 aa		-0.09	□□□□□ -2.42

Retrieved 63 of 5,963 RNA–protein pairs in 10.2 ms