RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YFR009W-AP0C5M9 85 aa1.1□□□□□ -2.23
PRP18YGR006W YBL044WP38194 122 aa1.1□□□□□ -2.23
PRP18YGR006W YBR230W-AQ3E762 66 aa1.1□□□□□ -2.23
PRP18YGR006W YPR010C-AA5Z2X5 72 aa1.09□□□□□ -2.23
PRP18YGR006W RPS27BP38711 82 aa1.09□□□□□ -2.23
PRP18YGR006W SIP18P50263 79 aa1.03□□□□□ -2.24
PRP18YGR006W TOS6P48560 102 aa1.01□□□□□ -2.25
PRP18YGR006W YCR108CQ3E819 63 aa1.01□□□□□ -2.25
PRP18YGR006W RPS29BP41058 56 aaKnown RBP0.99□□□□□ -2.25
PRP18YGR006W YGR146C-AQ8TGT9 53 aa0.99□□□□□ -2.25
PRP18YGR006W YOR008C-AQ3E7B9 74 aa0.96□□□□□ -2.26
PRP18YGR006W SEN1Q00416 2231 aaKnown RBP0.96□□□□□ -2.26
PRP18YGR006W PRP8P33334 2413 aaKnown RBP0.95□□□□□ -2.26
PRP18YGR006W YLR342W-AQ3E810 57 aa0.89□□□□□ -2.27
PRP18YGR006W YDR524C-BQ3E6R4 66 aa0.87□□□□□ -2.27
PRP18YGR006W YJL133C-AQ3E7A3 74 aa0.87□□□□□ -2.27
PRP18YGR006W CUP1-1P0CX80 61 aa0.86□□□□□ -2.27
PRP18YGR006W CUP1-2P0CX81 61 aa0.86□□□□□ -2.27
PRP18YGR006W COA2Q3E823 68 aa0.85□□□□□ -2.27
PRP18YGR006W YOR072W-BQ3E832 53 aa0.84□□□□□ -2.27
PRP18YGR006W NUM1Q00402 2748 aa0.83□□□□□ -2.28
PRP18YGR006W COX9P07255 59 aa0.83□□□□□ -2.28
PRP18YGR006W DDR2P89113 61 aa0.83□□□□□ -2.28
PRP18YGR006W YLL006W-AQ3E814 58 aa0.83□□□□□ -2.28
PRP18YGR006W FLO1P32768 1537 aa0.83□□□□□ -2.28
PRP18YGR006W YOR316C-AQ3E806 69 aa0.82□□□□□ -2.28
PRP18YGR006W YPR117WQ06116 2489 aa0.82□□□□□ -2.28
PRP18YGR006W TOM1Q03280 3268 aa0.79□□□□□ -2.28
PRP18YGR006W YGL258W-AQ3E740 77 aa0.78□□□□□ -2.28
PRP18YGR006W TOR1P35169 2470 aa0.76□□□□□ -2.29
PRP18YGR006W RPS29AP41057 56 aaKnown RBP0.76□□□□□ -2.29
PRP18YGR006W TOM7P53507 60 aa0.75□□□□□ -2.29
PRP18YGR006W RPL29P05747 59 aaPredicted RBP0.73□□□□□ -2.29
PRP18YGR006W VPS13Q07878 3144 aa0.73□□□□□ -2.29
PRP18YGR006W YDR034W-BQ6Q5X2 51 aa0.72□□□□□ -2.29
PRP18YGR006W TAO3P40468 2376 aa0.71□□□□□ -2.3
PRP18YGR006W YJL127C-BQ3E828 52 aa0.71□□□□□ -2.3
PRP18YGR006W TEL1P38110 2787 aa0.69□□□□□ -2.3
PRP18YGR006W GCN1P33892 2672 aaKnown RBP0.69□□□□□ -2.3
PRP18YGR006W YDR034C-AP0C289 58 aa0.68□□□□□ -2.3
PRP18YGR006W YHR073W-AP0C5N7 58 aa0.67□□□□□ -2.3
PRP18YGR006W TOR2P32600 2474 aaKnown RBP0.64□□□□□ -2.31
PRP18YGR006W UTP20P35194 2493 aaKnown RBP0.62□□□□□ -2.31
PRP18YGR006W IRA1P18963 3092 aa0.62□□□□□ -2.31
PRP18YGR006W IRA2P19158 3079 aa0.62□□□□□ -2.31
PRP18YGR006W FMP27Q06179 2628 aa0.62□□□□□ -2.31
PRP18YGR006W YHR050W-AQ05451 56 aa0.58□□□□□ -2.32
PRP18YGR006W CSF1Q12150 2958 aa0.56□□□□□ -2.32
PRP18YGR006W DYN1P36022 4092 aa0.55□□□□□ -2.32
PRP18YGR006W MDN1Q12019 4910 aaKnown RBP0.54□□□□□ -2.32
PRP18YGR006W HOR7Q05827 59 aa0.53□□□□□ -2.32
PRP18YGR006W YIL046W-AQ3E7Z4 54 aa0.53□□□□□ -2.32
PRP18YGR006W PMP3P87284 55 aa0.52□□□□□ -2.33
PRP18YGR006W TRA1P38811 3744 aa0.52□□□□□ -2.33
PRP18YGR006W YBR056W-AI2HB52 66 aa0.51□□□□□ -2.33
PRP18YGR006W MEC1P38111 2368 aa0.49□□□□□ -2.33
PRP18YGR006W YML054C-AQ3E809 52 aa0.47□□□□□ -2.33
PRP18YGR006W Q0017Q9ZZX8 53 aa0.46□□□□□ -2.34
PRP18YGR006W NCE101Q02820 53 aa0.42□□□□□ -2.34
PRP18YGR006W Q0297Q9ZZV8 51 aa0.42□□□□□ -2.34
PRP18YGR006W RPL39P04650 51 aa0.21□□□□□ -2.38
PRP18YGR006W YLL066W-BQ8TGJ7 56 aa0.21□□□□□ -2.38
PRP18YGR006W YMR105W-AQ8TGS8 64 aa0.18□□□□□ -2.38
Retrieved 63 of 5,963 RNA–protein pairs in 22 ms