RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C NUP192P47054 1683 aa0.9□□□□□ -2.26
SPB4YFL002C SIP18P50263 79 aa0.89□□□□□ -2.27
SPB4YFL002C HAP1P0CE41 1502 aa0.89□□□□□ -2.27
SPB4YFL002C IRA2P19158 3079 aa0.89□□□□□ -2.27
SPB4YFL002C YOL166W-AQ8TGJ1 51 aa0.88□□□□□ -2.27
SPB4YFL002C FKS3Q04952 1785 aa0.87□□□□□ -2.27
SPB4YFL002C YMR001C-AQ8TGS9 76 aa0.87□□□□□ -2.27
SPB4YFL002C BCK1Q01389 1478 aa0.86□□□□□ -2.27
SPB4YFL002C CSF1Q12150 2958 aa0.84□□□□□ -2.27
SPB4YFL002C TEL1P38110 2787 aa0.83□□□□□ -2.28
SPB4YFL002C YLR157W-DP0CE99 70 aa0.82□□□□□ -2.28
SPB4YFL002C YOR008C-AQ3E7B9 74 aa0.82□□□□□ -2.28
SPB4YFL002C YPR117WQ06116 2489 aa0.81□□□□□ -2.28
SPB4YFL002C TOR2P32600 2474 aaKnown RBP0.81□□□□□ -2.28
SPB4YFL002C FMP27Q06179 2628 aa0.8□□□□□ -2.28
SPB4YFL002C NUM1Q00402 2748 aa0.79□□□□□ -2.28
SPB4YFL002C TOR1P35169 2470 aa0.78□□□□□ -2.28
SPB4YFL002C GCN1P33892 2672 aaKnown RBP0.78□□□□□ -2.29
SPB4YFL002C TRA1P38811 3744 aa0.77□□□□□ -2.29
SPB4YFL002C YBR230W-AQ3E762 66 aa0.77□□□□□ -2.29
SPB4YFL002C FIG2P25653 1609 aa0.76□□□□□ -2.29
SPB4YFL002C TOS6P48560 102 aa0.75□□□□□ -2.29
SPB4YFL002C FLO1P32768 1537 aa0.75□□□□□ -2.29
SPB4YFL002C RPS27BP38711 82 aa0.75□□□□□ -2.29
SPB4YFL002C YKL023C-AQ2V2P3 75 aa0.72□□□□□ -2.29
SPB4YFL002C YOR192C-CQ3E736 78 aa0.71□□□□□ -2.3
SPB4YFL002C MEC1P38111 2368 aa0.71□□□□□ -2.3
SPB4YFL002C UTP20P35194 2493 aaKnown RBP0.69□□□□□ -2.3
SPB4YFL002C YDR034W-BQ6Q5X2 51 aa0.66□□□□□ -2.3
SPB4YFL002C YGR146C-AQ8TGT9 53 aa0.66□□□□□ -2.3
SPB4YFL002C YDR524C-BQ3E6R4 66 aa0.64□□□□□ -2.31
SPB4YFL002C DYN1P36022 4092 aa0.63□□□□□ -2.31
SPB4YFL002C RPS29AP41057 56 aaKnown RBP0.63□□□□□ -2.31
SPB4YFL002C MDN1Q12019 4910 aaKnown RBP0.6□□□□□ -2.31
SPB4YFL002C SMX2P40204 77 aaKnown RBP0.59□□□□□ -2.31
SPB4YFL002C YIL046W-AQ3E7Z4 54 aa0.57□□□□□ -2.32
SPB4YFL002C CUP1-1P0CX80 61 aa0.55□□□□□ -2.32
SPB4YFL002C CUP1-2P0CX81 61 aa0.55□□□□□ -2.32
SPB4YFL002C NCE101Q02820 53 aa0.52□□□□□ -2.33
SPB4YFL002C COA2Q3E823 68 aa0.52□□□□□ -2.33
SPB4YFL002C YLL006W-AQ3E814 58 aa0.52□□□□□ -2.33
SPB4YFL002C Q0297Q9ZZV8 51 aa0.49□□□□□ -2.33
SPB4YFL002C RPL39P04650 51 aa0.48□□□□□ -2.33
SPB4YFL002C COX9P07255 59 aa0.48□□□□□ -2.33
SPB4YFL002C YMR105W-AQ8TGS8 64 aa0.48□□□□□ -2.33
SPB4YFL002C YPR010C-AA5Z2X5 72 aa0.48□□□□□ -2.33
SPB4YFL002C YGL258W-AQ3E740 77 aa0.47□□□□□ -2.33
SPB4YFL002C HOR7Q05827 59 aa0.43□□□□□ -2.34
SPB4YFL002C TOM7P53507 60 aa0.43□□□□□ -2.34
SPB4YFL002C YOR072W-BQ3E832 53 aa0.41□□□□□ -2.34
SPB4YFL002C YLL066W-BQ8TGJ7 56 aa0.41□□□□□ -2.34
SPB4YFL002C YLR342W-AQ3E810 57 aa0.41□□□□□ -2.34
SPB4YFL002C PMP3P87284 55 aa0.37□□□□□ -2.35
SPB4YFL002C YDR034C-AP0C289 58 aa0.36□□□□□ -2.35
SPB4YFL002C RPL29P05747 59 aaPredicted RBP0.35□□□□□ -2.35
SPB4YFL002C YJL127C-BQ3E828 52 aa0.34□□□□□ -2.36
SPB4YFL002C DDR2P89113 61 aa0.33□□□□□ -2.36
SPB4YFL002C YJL133C-AQ3E7A3 74 aa0.31□□□□□ -2.36
SPB4YFL002C YOR316C-AQ3E806 69 aa0.3□□□□□ -2.36
SPB4YFL002C YHR073W-AP0C5N7 58 aa0.29□□□□□ -2.36
SPB4YFL002C Q0017Q9ZZX8 53 aa0.27□□□□□ -2.37
SPB4YFL002C YML054C-AQ3E809 52 aa0.22□□□□□ -2.37
SPB4YFL002C YHR050W-AQ05451 56 aa0.17□□□□□ -2.38
Retrieved 63 of 5,963 RNA–protein pairs in 42.2 ms