RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C YER181CP40097 107 aa0.15□□□□□ -2.38
UBP3YER151C VPS13Q07878 3144 aa0.15□□□□□ -2.38
UBP3YER151C TOM1Q03280 3268 aa0.15□□□□□ -2.39
UBP3YER151C ATG8P38182 117 aaRIP-Chip data0.15□□□□□ -2.39not detected
UBP3YER151C QCR10P37299 77 aa0.14□□□□□ -2.39
UBP3YER151C YDR381C-AQ3E6R5 114 aa0.14□□□□□ -2.39
UBP3YER151C YOR034C-AQ3E735 80 aa0.14□□□□□ -2.39
UBP3YER151C YFR032C-BQ8TGU2 87 aa0.14□□□□□ -2.39
UBP3YER151C YOL013W-AP0C272 63 aaPredicted RBP0.14□□□□□ -2.39
UBP3YER151C ATP15P21306 62 aa0.14□□□□□ -2.39
UBP3YER151C RPA12P32529 125 aaKnown RBP0.14□□□□□ -2.39
UBP3YER151C YDL085C-AQ3E7B7 68 aaKnown RBP0.14□□□□□ -2.39
UBP3YER151C CSF1Q12150 2958 aa0.13□□□□□ -2.39
UBP3YER151C VMA21P41806 77 aa0.13□□□□□ -2.39
UBP3YER151C WIP1Q2V2P8 89 aa0.13□□□□□ -2.39
UBP3YER151C OST5Q92316 86 aa0.13□□□□□ -2.39
UBP3YER151C PAI3P01094 68 aa0.12□□□□□ -2.39
UBP3YER151C YGR039WP53225 103 aa0.12□□□□□ -2.39
UBP3YER151C YIL102C-AQ2V2P5 75 aa0.12□□□□□ -2.39
UBP3YER151C SDH6Q3E785 79 aa0.11□□□□□ -2.39
UBP3YER151C NAT5Q08689 176 aa0.11□□□□□ -2.39
UBP3YER151C YLR363W-AQ3E747 85 aa0.1□□□□□ -2.39
UBP3YER151C ELC1Q03071 99 aa0.1□□□□□ -2.39
UBP3YER151C YBR201C-AQ2V2Q3 67 aa0.1□□□□□ -2.39
UBP3YER151C YMR001C-AQ8TGS9 76 aa0.1□□□□□ -2.39
UBP3YER151C LSO2Q3E772 92 aaKnown RBP0.07□□□□□ -2.4
UBP3YER151C YNL277W-AQ3E7Z0 62 aa0.07□□□□□ -2.4
UBP3YER151C YLR361C-AQ3E795 98 aa0.06□□□□□ -2.4
UBP3YER151C RPS28BP0C0X0 67 aaKnown RBP0.05□□□□□ -2.4
UBP3YER151C YBR121C-AP0C5L4 52 aa0.05□□□□□ -2.4
UBP3YER151C TOM6P33448 61 aa0.04□□□□□ -2.4
UBP3YER151C RPS28AQ3E7X9 67 aaPredicted RBP0.04□□□□□ -2.4
UBP3YER151C TRA1P38811 3744 aa0.04□□□□□ -2.4
UBP3YER151C YOL166W-AQ8TGJ1 51 aa0.03□□□□□ -2.4
UBP3YER151C YML100W-AQ8TGT0 57 aa0.03□□□□□ -2.4
UBP3YER151C SAE3P89114 91 aa0.02□□□□□ -2.41
UBP3YER151C YPL038W-AQ3E7B4 63 aa0.02□□□□□ -2.41
UBP3YER151C YIL102CP40488 101 aa0□□□□□ -2.41
UBP3YER151C RPL38P49167 78 aaKnown RBP0□□□□□ -2.41
UBP3YER151C YDR246W-AQ3E763 66 aa0□□□□□ -2.41
UBP3YER151C RPS30AP0CX33 63 aaKnown RBP-0□□□□□ -2.41
UBP3YER151C RPS30BP0CX34 63 aaKnown RBP-0□□□□□ -2.41
UBP3YER151C SBH1P52870 82 aa-0.01□□□□□ -2.41
UBP3YER151C YOR381W-AQ3E804 55 aa-0.01□□□□□ -2.41
UBP3YER151C HHY1P39982 102 aa-0.01□□□□□ -2.41
UBP3YER151C SLO1Q3E784 85 aa-0.03□□□□□ -2.41
UBP3YER151C YLR412C-AQ3E742 68 aa-0.05□□□□□ -2.42
UBP3YER151C YLR157W-EP0CF00 54 aa-0.05□□□□□ -2.42
UBP3YER151C PBI2P0CT04 75 aaKnown RBP-0.07□□□□□ -2.42
UBP3YER151C YNL198CP40166 100 aa-0.07□□□□□ -2.42
UBP3YER151C SSS1P35179 80 aa-0.08□□□□□ -2.42
UBP3YER151C YEL014CP39999 101 aa-0.09□□□□□ -2.42
UBP3YER151C YLR285C-AQ3E771 56 aa-0.09□□□□□ -2.42
UBP3YER151C NOP10Q6Q547 58 aaPredicted RBP-0.11□□□□□ -2.43
UBP3YER151C YIL134C-AQ45U18 67 aa-0.13□□□□□ -2.43
UBP3YER151C YGL014C-AP0C5N1 53 aa-0.14□□□□□ -2.43
UBP3YER151C YIR021W-AQ3E739 70 aa-0.15□□□□□ -2.43
UBP3YER151C YCR108CQ3E819 63 aa-0.15□□□□□ -2.43
UBP3YER151C SOM1Q05676 74 aa-0.16□□□□□ -2.43
UBP3YER151C YCR095W-AQ3E787 52 aa-0.16□□□□□ -2.43
UBP3YER151C YOL164W-AQ3E7A5 60 aa-0.24□□□□□ -2.45
UBP3YER151C RUB1Q03919 77 aa-0.25□□□□□ -2.45
UBP3YER151C YOR376W-AQ3E805 51 aa-0.3□□□□□ -2.46
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms