RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeastyeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB17YDL146W RPS29BP41058 56 aaKnown RBP1.72□□□□□ -2.13
LDB17YDL146W PRP8P33334 2413 aaKnown RBP1.71□□□□□ -2.14
LDB17YDL146W SIP18P50263 79 aa1.71□□□□□ -2.14
LDB17YDL146W NUP192P47054 1683 aa1.7□□□□□ -2.14
LDB17YDL146W RPS27BP38711 82 aa1.68□□□□□ -2.14
LDB17YDL146W YPR010C-AA5Z2X5 72 aa1.63□□□□□ -2.15
LDB17YDL146W GCN2P15442 1659 aa1.61□□□□□ -2.15
LDB17YDL146W YOR008C-AQ3E7B9 74 aa1.6□□□□□ -2.15
LDB17YDL146W YCR108CQ3E819 63 aa1.59□□□□□ -2.15
LDB17YDL146W YGR146C-AQ8TGT9 53 aa1.58□□□□□ -2.16
LDB17YDL146W TOS6P48560 102 aa1.56□□□□□ -2.16
LDB17YDL146W TOM1Q03280 3268 aa1.55□□□□□ -2.16
LDB17YDL146W SMX2P40204 77 aaKnown RBP1.52□□□□□ -2.17
LDB17YDL146W YPR117WQ06116 2489 aa1.51□□□□□ -2.17
LDB17YDL146W NUM1Q00402 2748 aa1.5□□□□□ -2.17
LDB17YDL146W VPS13Q07878 3144 aa1.5□□□□□ -2.17
LDB17YDL146W TOR1P35169 2470 aa1.5□□□□□ -2.17
LDB17YDL146W TAO3P40468 2376 aa1.45□□□□□ -2.18
LDB17YDL146W TOR2P32600 2474 aaKnown RBP1.45□□□□□ -2.18
LDB17YDL146W FIG2P25653 1609 aa1.44□□□□□ -2.18
LDB17YDL146W CUP1-1P0CX80 61 aa1.42□□□□□ -2.18
LDB17YDL146W CUP1-2P0CX81 61 aa1.42□□□□□ -2.18
LDB17YDL146W FLO1P32768 1537 aa1.39□□□□□ -2.19
LDB17YDL146W COA2Q3E823 68 aa1.37□□□□□ -2.19
LDB17YDL146W TEL1P38110 2787 aa1.36□□□□□ -2.19
LDB17YDL146W YDR524C-BQ3E6R4 66 aa1.35□□□□□ -2.19
LDB17YDL146W YDR034W-BQ6Q5X2 51 aa1.35□□□□□ -2.19
LDB17YDL146W YLL006W-AQ3E814 58 aa1.34□□□□□ -2.19
LDB17YDL146W GCN1P33892 2672 aaKnown RBP1.33□□□□□ -2.2
LDB17YDL146W FMP27Q06179 2628 aa1.3□□□□□ -2.2
LDB17YDL146W YGL258W-AQ3E740 77 aa1.3□□□□□ -2.2
LDB17YDL146W YOR072W-BQ3E832 53 aa1.3□□□□□ -2.2
LDB17YDL146W UTP20P35194 2493 aaKnown RBP1.29□□□□□ -2.2
LDB17YDL146W IRA2P19158 3079 aa1.29□□□□□ -2.2
LDB17YDL146W YLR342W-AQ3E810 57 aa1.27□□□□□ -2.21
LDB17YDL146W IRA1P18963 3092 aa1.27□□□□□ -2.21
LDB17YDL146W COX9P07255 59 aa1.25□□□□□ -2.21
LDB17YDL146W RPS29AP41057 56 aaKnown RBP1.25□□□□□ -2.21
LDB17YDL146W YJL133C-AQ3E7A3 74 aa1.24□□□□□ -2.21
LDB17YDL146W CSF1Q12150 2958 aa1.21□□□□□ -2.22
LDB17YDL146W YOR316C-AQ3E806 69 aa1.21□□□□□ -2.22
LDB17YDL146W MEC1P38111 2368 aa1.19□□□□□ -2.22
LDB17YDL146W DDR2P89113 61 aa1.18□□□□□ -2.22
LDB17YDL146W TRA1P38811 3744 aa1.18□□□□□ -2.22
LDB17YDL146W YIL046W-AQ3E7Z4 54 aa1.14□□□□□ -2.23
LDB17YDL146W YBR056W-AI2HB52 66 aa1.1□□□□□ -2.23
LDB17YDL146W DYN1P36022 4092 aa1.06□□□□□ -2.24
LDB17YDL146W TOM7P53507 60 aa1.03□□□□□ -2.24
LDB17YDL146W MDN1Q12019 4910 aaKnown RBP1.02□□□□□ -2.25
LDB17YDL146W YDR034C-AP0C289 58 aa1.01□□□□□ -2.25
LDB17YDL146W Q0297Q9ZZV8 51 aa1□□□□□ -2.25
LDB17YDL146W RPL29P05747 59 aaPredicted RBP0.99□□□□□ -2.25
LDB17YDL146W YJL127C-BQ3E828 52 aa0.99□□□□□ -2.25
LDB17YDL146W YHR073W-AP0C5N7 58 aa0.91□□□□□ -2.26
LDB17YDL146W NCE101Q02820 53 aa0.89□□□□□ -2.27
LDB17YDL146W RPL39P04650 51 aa0.88□□□□□ -2.27
LDB17YDL146W YHR050W-AQ05451 56 aa0.88□□□□□ -2.27
LDB17YDL146W HOR7Q05827 59 aa0.85□□□□□ -2.27
LDB17YDL146W YMR105W-AQ8TGS8 64 aa0.8□□□□□ -2.28
LDB17YDL146W PMP3P87284 55 aa0.74□□□□□ -2.29
LDB17YDL146W YML054C-AQ3E809 52 aa0.7□□□□□ -2.3
LDB17YDL146W Q0017Q9ZZX8 53 aa0.7□□□□□ -2.3
LDB17YDL146W YLL066W-BQ8TGJ7 56 aa0.65□□□□□ -2.31
Retrieved 63 of 5,963 RNA–protein pairs in 9.7 ms