RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YOL166W-AQ8TGJ1 51 aa3.32□□□□□ -1.88
PDB1YBR221C YOR072WQ08486 104 aa3.31□□□□□ -1.88
PDB1YBR221C YPR108W-AQ3E7B3 70 aa3.3□□□□□ -1.88
PDB1YBR221C MVB12P42939 101 aa3.29□□□□□ -1.88
PDB1YBR221C SDH6Q3E785 79 aa3.29□□□□□ -1.88
PDB1YBR221C YMR141CP40211 102 aa3.26□□□□□ -1.89
PDB1YBR221C HUG1Q6Q5K6 68 aa3.25□□□□□ -1.89
PDB1YBR221C COX7P10174 60 aa3.24□□□□□ -1.89
PDB1YBR221C YAR064WP39563 99 aa3.22□□□□□ -1.89
PDB1YBR221C YGL258W-AQ3E740 77 aa3.22□□□□□ -1.89
PDB1YBR221C YDL012CQ12489 107 aa3.21□□□□□ -1.9
PDB1YBR221C YJR107C-AP0CT86 78 aa3.2□□□□□ -1.9
PDB1YBR221C YJR128WP47162 119 aa3.2□□□□□ -1.9
PDB1YBR221C YOR011W-AQ3E807 68 aa3.2□□□□□ -1.9
PDB1YBR221C YLR146W-AQ2V2P1 62 aa3.19□□□□□ -1.9
PDB1YBR221C YOL013W-AP0C272 63 aaPredicted RBP3.18□□□□□ -1.9
PDB1YBR221C YMR001C-AQ8TGS9 76 aa3.18□□□□□ -1.9
PDB1YBR221C YLR157W-DP0CE99 70 aa3.15□□□□□ -1.91
PDB1YBR221C YBL039W-BP0C268 59 aa3.14□□□□□ -1.91
PDB1YBR221C RPL38P49167 78 aaKnown RBP3.13□□□□□ -1.91
PDB1YBR221C YGR025WP53216 100 aa3.13□□□□□ -1.91
PDB1YBR221C YIL102CP40488 101 aa3.09□□□□□ -1.91
PDB1YBR221C YBR200W-AQ3E755 54 aa3.09□□□□□ -1.91
PDB1YBR221C HHY1P39982 102 aa3.08□□□□□ -1.92
PDB1YBR221C TOM7P53507 60 aa3.07□□□□□ -1.92
PDB1YBR221C RPC10P40422 70 aa3.05□□□□□ -1.92
PDB1YBR221C YLL066W-BQ8TGJ7 56 aa3.05□□□□□ -1.92
PDB1YBR221C YBR072C-AQ3E794 53 aa3.04□□□□□ -1.92
PDB1YBR221C COA2Q3E823 68 aa3.01□□□□□ -1.93
PDB1YBR221C YDR034C-AP0C289 58 aa3□□□□□ -1.93
PDB1YBR221C YOR394C-AQ8TGJ0 55 aa2.99□□□□□ -1.93
PDB1YBR221C YHR213W-BQ8TGK1 99 aa2.97□□□□□ -1.93
PDB1YBR221C YPR010C-AA5Z2X5 72 aa2.96□□□□□ -1.94
PDB1YBR221C OLI1P61829 76 aa2.95□□□□□ -1.94
PDB1YBR221C TOS6P48560 102 aa2.93□□□□□ -1.94
PDB1YBR221C YLR307C-AQ3E825 87 aa2.93□□□□□ -1.94
PDB1YBR221C YBR230W-AQ3E762 66 aa2.91□□□□□ -1.94
PDB1YBR221C YLR342W-AQ3E810 57 aa2.88□□□□□ -1.95
PDB1YBR221C HUA1P40325 198 aa2.87□□□□□ -1.95
PDB1YBR221C PMP3P87284 55 aa2.85□□□□□ -1.95
PDB1YBR221C YFR009W-AP0C5M9 85 aa2.83□□□□□ -1.96
PDB1YBR221C YBL044WP38194 122 aa2.68□□□□□ -1.98
PDB1YBR221C YOR008C-AQ3E7B9 74 aa2.68□□□□□ -1.98
PDB1YBR221C YOL164W-AQ3E7A5 60 aa2.67□□□□□ -1.98
PDB1YBR221C YCR108CQ3E819 63 aa2.67□□□□□ -1.98
PDB1YBR221C YGR146C-AQ8TGT9 53 aa2.65□□□□□ -1.99
PDB1YBR221C YBR016WP38216 128 aa2.64□□□□□ -1.99
PDB1YBR221C YLR157W-EP0CF00 54 aa2.63□□□□□ -1.99
PDB1YBR221C YJL133C-AQ3E7A3 74 aa2.62□□□□□ -1.99
PDB1YBR221C RPL37BP51402 88 aaKnown RBP2.56□□□□□ -2
PDB1YBR221C RPL37AP49166 88 aaKnown RBP2.54□□□□□ -2
PDB1YBR221C DDR2P89113 61 aa2.52□□□□□ -2.01
PDB1YBR221C YLL006W-AQ3E814 58 aa2.52□□□□□ -2.01
PDB1YBR221C RPL29P05747 59 aaPredicted RBP2.46□□□□□ -2.02
PDB1YBR221C YOR316C-AQ3E806 69 aa2.39□□□□□ -2.03
PDB1YBR221C YJL127C-BQ3E828 52 aa2.38□□□□□ -2.03
PDB1YBR221C YOR072W-BQ3E832 53 aa2.34□□□□□ -2.03
PDB1YBR221C Q0017Q9ZZX8 53 aa2.31□□□□□ -2.04
PDB1YBR221C RPS29AP41057 56 aaKnown RBP2.26□□□□□ -2.05
PDB1YBR221C RPS29BP41058 56 aaKnown RBP2.23□□□□□ -2.05
PDB1YBR221C YHR073W-AP0C5N7 58 aa2.17□□□□□ -2.06
PDB1YBR221C YML054C-AQ3E809 52 aa1.97□□□□□ -2.09
PDB1YBR221C YHR050W-AQ05451 56 aa1.74□□□□□ -2.13
Retrieved 63 of 5,963 RNA–protein pairs in 8.6 ms