RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
VPS15YBR097W YLR255CO13574 117 aa1.13□□□□□ -2.23
VPS15YBR097W YER084WP40057 128 aa1.13□□□□□ -2.23
VPS15YBR097W YDR034C-AP0C289 58 aa1.12□□□□□ -2.23
VPS15YBR097W RPL29P05747 59 aaPredicted RBP1.12□□□□□ -2.23
VPS15YBR097W POL2P21951 2222 aaKnown RBP1.11□□□□□ -2.23
VPS15YBR097W YDL012CQ12489 107 aa1.11□□□□□ -2.23
VPS15YBR097W YGR121W-AQ3E816 71 aa1.11□□□□□ -2.23
VPS15YBR097W Q0017Q9ZZX8 53 aa1.11□□□□□ -2.23
VPS15YBR097W AUA1P32450 94 aa1.11□□□□□ -2.23
VPS15YBR097W RPL39P04650 51 aa1.1□□□□□ -2.23
VPS15YBR097W YHR050W-AQ05451 56 aa1.1□□□□□ -2.23
VPS15YBR097W YDR246W-AQ3E763 66 aa1.1□□□□□ -2.23
VPS15YBR097W YLR157W-EP0CF00 54 aa1.09□□□□□ -2.23
VPS15YBR097W MLP1Q02455 1875 aaKnown RBP1.09□□□□□ -2.24
VPS15YBR097W LAA1P39526 2014 aa1.09□□□□□ -2.24
VPS15YBR097W BLM10P43583 2143 aa1.09□□□□□ -2.24
VPS15YBR097W RPS27AP35997 82 aaKnown RBP1.08□□□□□ -2.24
VPS15YBR097W RPS27BP38711 82 aa1.08□□□□□ -2.24
VPS15YBR097W FKS1P38631 1876 aaKnown RBP1.08□□□□□ -2.24
VPS15YBR097W FAS1P07149 2051 aaKnown RBP1.07□□□□□ -2.24
VPS15YBR097W YHR073W-AP0C5N7 58 aa1.06□□□□□ -2.24
VPS15YBR097W YCL042WP25572 119 aa1.06□□□□□ -2.24
VPS15YBR097W MYO1P08964 1928 aa1.06□□□□□ -2.24
VPS15YBR097W PRP8P33334 2413 aaKnown RBP1.05□□□□□ -2.24
VPS15YBR097W CYR1P08678 2026 aaKnown RBP1.05□□□□□ -2.24
VPS15YBR097W YHR212W-AP0CX91 67 aa1.05□□□□□ -2.24
VPS15YBR097W MOT1P32333 1867 aa1.04□□□□□ -2.24
VPS15YBR097W YOL166W-AQ8TGJ1 51 aa1.04□□□□□ -2.24
VPS15YBR097W YLR422WQ06409 1932 aa1.04□□□□□ -2.24
VPS15YBR097W UBR1P19812 1950 aa1.03□□□□□ -2.24
VPS15YBR097W MEC1P38111 2368 aa1.03□□□□□ -2.24
VPS15YBR097W RPL37BP51402 88 aaKnown RBP1.03□□□□□ -2.25
VPS15YBR097W CCH1P50077 2039 aa1.03□□□□□ -2.25
VPS15YBR097W GIS2P53849 153 aaKnown RBP RIP-Chip data1.02□□□□□ -2.25not detected
VPS15YBR097W YCR108CQ3E819 63 aa1.02□□□□□ -2.25
VPS15YBR097W YPR117WQ06116 2489 aa1.02□□□□□ -2.25
VPS15YBR097W RPS29BP41058 56 aaKnown RBP1.01□□□□□ -2.25
VPS15YBR097W UTP20P35194 2493 aaKnown RBP1□□□□□ -2.25
VPS15YBR097W TOR2P32600 2474 aaKnown RBP1□□□□□ -2.25
VPS15YBR097W RDS3Q06835 107 aaPredicted RBP0.99□□□□□ -2.25
VPS15YBR097W RIF1P29539 1916 aa0.99□□□□□ -2.25
VPS15YBR097W YDR210WQ03482 75 aa0.98□□□□□ -2.25
VPS15YBR097W YHR086W-AQ3E746 53 aa0.98□□□□□ -2.25
VPS15YBR097W RPL37AP49166 88 aaKnown RBP0.97□□□□□ -2.25
VPS15YBR097W YBR016WP38216 128 aa0.96□□□□□ -2.26
VPS15YBR097W TOR1P35169 2470 aa0.96□□□□□ -2.26
VPS15YBR097W SLH1P53327 1967 aaKnown RBP0.95□□□□□ -2.26
VPS15YBR097W RPS29AP41057 56 aaKnown RBP0.93□□□□□ -2.26
VPS15YBR097W YBR056W-AI2HB52 66 aa0.92□□□□□ -2.26
VPS15YBR097W STT4P37297 1900 aa0.92□□□□□ -2.26
VPS15YBR097W TEL1P38110 2787 aa0.92□□□□□ -2.26
VPS15YBR097W YLL066W-BQ8TGJ7 56 aa0.89□□□□□ -2.27
VPS15YBR097W Q0297Q9ZZV8 51 aa0.87□□□□□ -2.27
VPS15YBR097W TRA1P38811 3744 aa0.8□□□□□ -2.28
VPS15YBR097W YIL046W-AQ3E7Z4 54 aa0.8□□□□□ -2.28
VPS15YBR097W GCN1P33892 2672 aaKnown RBP0.78□□□□□ -2.28
VPS15YBR097W FMP27Q06179 2628 aa0.72□□□□□ -2.29
VPS15YBR097W IRA1P18963 3092 aa0.62□□□□□ -2.31
VPS15YBR097W IRA2P19158 3079 aa0.48□□□□□ -2.33
VPS15YBR097W TOM1Q03280 3268 aa0.46□□□□□ -2.34
VPS15YBR097W VPS13Q07878 3144 aa0.41□□□□□ -2.34
VPS15YBR097W CSF1Q12150 2958 aa0.31□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 53.2 ms