RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ASB3Q9Y575 518 aa7.9□□□□□ -1.14
PHGDH-225ENST00000641720 UBR5O95071 2799 aaPredicted RBP7.9□□□□□ -1.15
PHGDH-225ENST00000641720 OR6C75A6NL08 312 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 K7EQS6 105 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 XPOTO43592 962 aaKnown RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ATG13O75143 517 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 RHOBTB1O94844 696 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 LETM1O95202 739 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TNNC2P02585 160 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 C4BPAP04003 597 aaKnown RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CYP11A1P05108 521 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 KRT13P13646 458 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CD59P13987 128 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TYMPP19971 482 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 DRD1P21728 446 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 P2RY2P41231 377 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 MARSP56192 900 aaKnown RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 LILRA4P59901 499 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 MYL5Q02045 173 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 YWHAHQ04917 246 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ENPEPQ07075 957 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 PLD1Q13393 1074 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 BIRC3Q13489 604 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF268Q14587 947 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 IQCB1Q15051 598 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 SURF1Q15526 300 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ELF2Q15723 593 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 DUOXA2Q1HG44 320 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 COL28A1Q2UY09 1125 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 EML3Q32P44 896 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ZACNQ401N2 412 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CBWD6Q4V339 395 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CT47A1Q5JQC4 288 aaPredicted RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CBWD3Q5JTY5 395 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CBWD5Q5RIA9 395 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TCERG1LQ5VWI1 586 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 SLC23A3Q6PIS1 610 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 SV2AQ7L0J3 742 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 LRRTM3Q86VH5 581 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CHCHD4Q8N4Q1 142 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 STKLD1Q8NE28 680 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 APPL2Q8NEU8 664 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ENOX1Q8TC92 643 aaKnown RBP7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TAS1R2Q8TE23 839 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 USP33Q8TEY7 942 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 ANKRD36BP1Q96IX9 119 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 TPSD1Q9BZJ3 242 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 XYLT2Q9H1B5 865 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 THAP9Q9H5L6 903 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CAPN10Q9HC96 672 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 CD248Q9HCU0 757 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.89□□□□□ -1.152e-20■■■■■ 347.8
PHGDH-225ENST00000641720 FANCLQ9NW38 375 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 SLC8A2Q9UPR5 921 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 INVSQ9Y283 1065 aa7.89□□□□□ -1.15
PHGDH-225ENST00000641720 PIEZO2Q9H5I5 2752 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 KCNJ18B7U540 433 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 IKBKBO14920 756 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 KHNYNO15037 678 aaKnown RBP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 DKK1O94907 266 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 HLA-DRAP01903 254 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 KRT19P08727 400 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF18P17022 549 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ENGP17813 658 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 PIK3CAP42336 1068 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 PTGER3P43115 390 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 TAF6P49848 677 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF165P49910 485 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 MXI1P50539 228 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 EPHB3P54753 998 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF445P59923 1031 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 MYL6P60660 151 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 RBP5P82980 135 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 MYL7Q01449 175 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 SCAPQ12770 1279 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 GRSF1Q12849 480 aaKnown RBP eCLIP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 KCNJ12Q14500 433 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 TPD52L1Q16890 204 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 FBXO43Q4G163 708 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 SPOPLQ6IQ16 392 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 C19orf48Q6RUI8 117 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 LUZP1Q86V48 1076 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 LRRC52Q8N7C0 313 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 SEMA4DQ92854 862 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ZNF560Q96MR9 790 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 PKMYT1Q99640 499 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 P2RY13Q9BPV8 354 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 BPIFA3Q9BQP9 254 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 PI4K2AQ9BTU6 479 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 OXCT2Q9BYC2 517 aaPredicted RBP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ZCWPW1Q9H0M4 648 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 ECT2Q9H8V3 914 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 CBX8Q9HC52 389 aa7.88□□□□□ -1.15
PHGDH-225ENST00000641720 METTL14Q9HCE5 456 aaKnown RBP7.88□□□□□ -1.15
PHGDH-225ENST00000641720 TMEM8AQ9HCN3 771 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms