RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 TBCBQ99426 244 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 TRABDQ9H4I3 376 aa17.8■□□□□ 0.44
PHGDH-211ENST00000641213 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 H7C0C1 242 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 TFE3P19532 575 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 ADORA2BP29275 332 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PHBP35232 272 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 GNL1P36915 607 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 ATP5OP48047 213 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 HDAC4P56524 1084 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 BST2Q10589 180 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 NUGGCQ68CJ6 796 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PDIK1LQ8N165 341 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 ANKRD52Q8NB46 1076 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 CLEC4CQ8WTT0 213 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 MRRFQ96E11 262 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 SGSM3Q96HU1 749 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 USP29Q9HBJ7 922 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 GDAP2Q9NXN4 497 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PCNTO95613 3336 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 H0YHG0 523 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 APOL1O14791 398 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 MDM4O15151 490 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 SPAG7O75391 227 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 MYL3P08590 195 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 KCNE1P15382 129 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 KRT15P19012 456 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 TGM2P21980 687 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 WDR4P57081 412 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 GEMIN4P57678 1058 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 SOX4Q06945 474 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 CCL14Q16627 93 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 XKR4Q5GH76 650 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF618Q5T7W0 954 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 SLC9A4Q6AI14 798 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 C3orf62Q6ZUJ4 267 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 VSIG1Q86XK7 387 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PCDH19Q8TAB3 1148 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 TGS1Q96RS0 853 aaKnown RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PSMC3IPQ9P2W1 217 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-211ENST00000641213 FETUBQ9UGM5 382 aa17.79■□□□□ 0.44
PHGDH-211ENST00000641213 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.443e-6■■■■□ 19.9
PHGDH-211ENST00000641213 GHRP10912 638 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 DESP17661 470 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 PTPN9P43378 593 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 RPL34P49207 117 aaKnown RBP17.78■□□□□ 0.44
PHGDH-211ENST00000641213 BCAT1P54687 386 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 BEX3Q00994 111 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 MTM1Q13496 603 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 KCNJ11Q14654 390 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 BBS9Q3SYG4 887 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 FBXW10Q5XX13 1052 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 SLC26A9Q7LBE3 791 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 CNPY4Q8N129 248 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 NCAPGQ9BPX3 1015 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 C11orf84Q9BUA3 381 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-211ENST00000641213 GOLGA2P5Q9HBQ8 144 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 SENP1Q9P0U3 644 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 PNPLA4P41247 253 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 CPT1AP50416 773 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 BCAR1P56945 870 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 EFTUD2Q15029 972 aaKnown RBP eCLIP17.78■□□□□ 0.443e-6■■■■□ 23.9
PHGDH-211ENST00000641213 LIMS2Q7Z4I7 341 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 PALM2Q8IXS6 379 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 APPL2Q8NEU8 664 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 DENND1AQ8TEH3 1009 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 FBF1Q8TES7 1133 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-211ENST00000641213 FAF2Q96CS3 445 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 TSPAN18Q96SJ8 248 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 ADAM33Q9BZ11 813 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 SNX25Q9H3E2 840 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 ACSS3Q9H6R3 686 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 USP15Q9Y4E8 981 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-211ENST00000641213 HEY1Q9Y5J3 304 aa17.78■□□□□ 0.44
PHGDH-211ENST00000641213 A0A1W2PPM1 405 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 XPOTO43592 962 aaKnown RBP17.77■□□□□ 0.44
PHGDH-211ENST00000641213 ATP2C2O75185 946 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 LCP1P13796 627 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 FOXN2P32314 431 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 SCTRP47872 440 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 TAF6P49848 677 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 CRYBB1P53674 252 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-211ENST00000641213 SLC18A1P54219 525 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 IL9RQ01113 521 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 PPP6R3Q5H9R7 873 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-211ENST00000641213 FAM182AQ5T1J6 154 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 RTP4Q96DX8 246 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 SMC6Q96SB8 1091 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 ZNF670Q9BS34 389 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 DHRS4Q9BTZ2 278 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 IPPQ9Y573 584 aa17.77■□□□□ 0.44
PHGDH-211ENST00000641213 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
PHGDH-211ENST00000641213 ZNF487B1APH4 448 aa17.76■□□□□ 0.43
PHGDH-211ENST00000641213 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms