RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CYTH4Q9UIA0 394 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 CPQQ9Y646 472 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 ZDBF2Q9HCK1 2354 aa28.1■■■□□ 2.09
VEGFA-231ENST00000640499 LEFTY2O00292 366 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 TEX33O43247 280 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 RPL34P49207 117 aaKnown RBP28.09■■■□□ 2.09
VEGFA-231ENST00000640499 RGS7P49802 495 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 VCPP55072 806 aaKnown RBP28.09■■■□□ 2.09
VEGFA-231ENST00000640499 STARD6P59095 220 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 TRIM68Q6AZZ1 485 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 SLC47A2Q86VL8 602 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 WDTC1Q8N5D0 677 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 ANKRD20A12PQ8NF67 263 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 WBP2Q969T9 261 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 ERGIC2Q96RQ1 377 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 HPS4Q9NQG7 708 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.09■■■□□ 2.09
VEGFA-231ENST00000640499 SMPD4Q9NXE4 827 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 NUDT5Q9UKK9 219 aa28.09■■■□□ 2.09
VEGFA-231ENST00000640499 OTOL1A6NHN0 477 aaPredicted RBP28.08■■■□□ 2.09
VEGFA-231ENST00000640499 THAP12O43422 761 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 PI15O43692 258 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 TLR5O60602 858 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 TPM2P07951 284 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 PDE6CP51160 858 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 SLC8A3P57103 927 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 UBXN1Q04323 297 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 ADIGQ0VDE8 80 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 RAPGEF1Q13905 1077 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 MTF1Q14872 753 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 STK33Q9BYT3 514 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 TBC1D17Q9HA65 648 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 FAM207AQ9NSI2 230 aaPredicted RBP28.08■■■□□ 2.09
VEGFA-231ENST00000640499 GTSE1Q9NYZ3 720 aa28.08■■■□□ 2.09
VEGFA-231ENST00000640499 ZNF318Q5VUA4 2279 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 KMT2EQ8IZD2 1858 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 PIK3R2O00459 728 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 ZBED1O96006 694 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 MBL2P11226 248 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-231ENST00000640499 RARGP13631 454 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 NAP1L5Q96NT1 182 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-231ENST00000640499 LINC00597Q9H2U6 94 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 LRRC4Q9HBW1 653 aa28.07■■■□□ 2.08
VEGFA-231ENST00000640499 RTN4Q9NQC3 1192 aaKnown RBP28.07■■■□□ 2.08
VEGFA-231ENST00000640499 MTF2Q9Y483 593 aaPredicted RBP28.07■■■□□ 2.08
VEGFA-231ENST00000640499 F8VZ95 297 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 MDM4O15151 490 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 ARSAP15289 507 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 CD72P21854 359 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 RFX1P22670 979 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 SOX9P48436 509 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 JAM2P57087 298 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 MEA1Q16626 185 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 ZNF276Q8N554 614 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 FLCNQ8NFG4 579 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 TTC8Q8TAM2 541 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 CHFRQ96EP1 664 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 KLF16Q9BXK1 252 aaPredicted RBP28.06■■■□□ 2.08
VEGFA-231ENST00000640499 THG1LQ9NWX6 298 aaKnown RBP28.06■■■□□ 2.08
VEGFA-231ENST00000640499 NAGPAQ9UK23 515 aa28.06■■■□□ 2.08
VEGFA-231ENST00000640499 MED7O43513 233 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 F5P12259 2224 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 LCP1P13796 627 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 POLR2FP61218 127 aaKnown RBP28.05■■■□□ 2.08
VEGFA-231ENST00000640499 PLCB2Q00722 1185 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 PRKCQQ04759 706 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 PTK2Q05397 1052 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 TPRG1Q6ZUI0 275 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 ZNF687Q8N1G0 1237 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 SCML4Q8N228 414 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 TMEM105Q8N8V8 129 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 TTC16Q8NEE8 873 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 CLEC4CQ8WTT0 213 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 HSFY1Q96LI6 401 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 SLC4A5Q9BY07 1137 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 FOXQ1Q9C009 403 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 EBF3Q9H4W6 596 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 CLIC5Q9NZA1 410 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 PCDHGC3Q9UN70 934 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 WNT6Q9Y6F9 365 aa28.05■■■□□ 2.08
VEGFA-231ENST00000640499 YJEFN3A6XGL0 299 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 E7ENQ6 273 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 SCAMP3O14828 347 aaKnown RBP28.04■■■□□ 2.08
VEGFA-231ENST00000640499 GREM1O60565 184 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 DAOAP59103 153 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 YWHAGP61981 247 aaKnown RBP eCLIP28.04■■■□□ 2.08
VEGFA-231ENST00000640499 ASTLQ6HA08 431 aaPredicted RBP28.04■■■□□ 2.08
VEGFA-231ENST00000640499 OSCP1Q8WVF1 389 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 DDX1Q92499 740 aaKnown RBP28.04■■■□□ 2.08
VEGFA-231ENST00000640499 MFSD1Q9H3U5 465 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 NLRC4Q9NPP4 1024 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 CNGB3Q9NQW8 809 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 CFAP97Q9P2B7 532 aa28.04■■■□□ 2.08
VEGFA-231ENST00000640499 A0A1B0GTH6 734 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 AVPR2P30518 371 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 PSEN1P49768 467 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 CLCN5P51795 746 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 KLHDC10Q6PID8 442 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 STK32AQ8WU08 396 aa28.03■■■□□ 2.08
VEGFA-231ENST00000640499 DUS2Q9NX74 493 aaKnown RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms