RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	DAAM2	Q86T65	1068 aa		18.61	■□□□□ 0.57
SPIN3-238	ENST00000640421	FAM149B1	Q96BN6	582 aa		18.61	■□□□□ 0.57
SPIN3-238	ENST00000640421	LMAN2L	Q9H0V9	348 aa		18.61	■□□□□ 0.57
SPIN3-238	ENST00000640421	MAFF	Q9ULX9	164 aa		18.61	■□□□□ 0.57
SPIN3-238	ENST00000640421		A0A1W2PPC1	479 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	FTCD	O95954	541 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	C8A	P07357	584 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	HMGA1	P17096	107 aa	Known RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	TFE3	P19532	575 aa	Predicted RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	ETF1	P62495	437 aa	Known RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	RAB6C	Q53S08	254 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SCD5	Q86SK9	330 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	TRIM58	Q8NG06	486 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SLC22A17	Q8WUG5	538 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	RXFP2	Q8WXD0	754 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	TTLL2	Q9BWV7	592 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	RAB6C	Q9H0N0	254 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	NMUR1	Q9HB89	426 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	OSER1	Q9NX31	292 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SCML2	Q9UQR0	700 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	MYO1F	O00160	1098 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	LTF	P02788	710 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	ALDH1A3	P47895	512 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	YWHAZ	P63104	245 aa	Known RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	EFHC1	Q5JVL4	640 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SH3PXD2A	Q5TCZ1	1133 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SYPL2	Q5VXT5	272 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	C11orf63	Q6NUN7	778 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	SYT10	Q6XYQ8	523 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	IRGQ	Q8WZA9	623 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	CFAP57	Q96MR6	1250 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	TTYH1	Q9H313	450 aa	Predicted RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	MAN1C1	Q9NR34	630 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	GMIP	Q9P107	970 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	HCFC2	Q9Y5Z7	792 aa		18.6	■□□□□ 0.57
SPIN3-238	ENST00000640421	HSF2BP	O75031	334 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	PROSC	O94903	275 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	PDGFRA	P16234	1089 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	YWHAQ	P27348	245 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	PITX1	P78337	314 aa	Predicted RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	TAF10	Q12962	218 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	IFI16	Q16666	785 aa	Known RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	CCDC14	Q49A88	953 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	ARFGAP1	Q8N6T3	406 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	MRPL38	Q96DV4	380 aa	Known RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	CEP295NL	Q96MC4	621 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	SLC2A13	Q96QE2	648 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	FBXO44	Q9H4M3	255 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	POPDC2	Q9HBU9	364 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	ASNSD1	Q9NWL6	643 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	CALCOCO1	Q9P1Z2	691 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	NAALADL1	Q9UQQ1	740 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	ALG6	Q9Y672	507 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	DOCK6	Q96HP0	2047 aa		18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421	PRRC2B	Q5JSZ5	2229 aa	Known RBP	18.59	■□□□□ 0.57
SPIN3-238	ENST00000640421		A0A1W2PQH9	124 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	ENC1	O14682	589 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	SART1	O43290	800 aa	Known RBP	18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	DAB1	O75553	588 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	RFPL2	O75678	378 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	RTN3	O95197	1032 aa	Predicted RBP	18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	TCF4	P15884	667 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	ZNF143	P52747	638 aa	Predicted RBP	18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	OTUD1	Q5VV17	481 aa	Predicted RBP	18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	BSPRY	Q5W0U4	402 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	ARC	Q7LC44	396 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	DEFB106A	Q8N104	65 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	FNIP1	Q8TF40	1166 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	EDEM1	Q92611	657 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	ALS2CR12	Q96Q35	445 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	DNAI1	Q9UI46	699 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	PRUNE2	Q8WUY3	3088 aa		18.58	■□□□□ 0.57
SPIN3-238	ENST00000640421	SOX1	O00570	391 aa	Predicted RBP	18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	NCK2	O43639	380 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	GLI1	P08151	1106 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	TNNT1	P13805	278 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	GPD1	P21695	349 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	COMT	P21964	271 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	PSMA2	P25787	234 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	NRIP1	P48552	1158 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	YWHAG	P61981	247 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	DUSP6	Q16828	381 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	NT5DC3	Q86UY8	548 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	VN1R2	Q8NFZ6	395 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	FBXO32	Q969P5	355 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	PSMG2	Q969U7	264 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	TLE6	Q9H808	572 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	IP6K2	Q9UHH9	426 aa		18.58	■□□□□ 0.56
SPIN3-238	ENST00000640421	MATK	P42679	507 aa		18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	DCAF6	Q58WW2	860 aa		18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	CCDC149	Q6ZUS6	474 aa		18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	MON1A	Q86VX9	555 aa		18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	NIPA2	Q8N8Q9	360 aa		18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	CALR3	Q96L12	384 aa	Known RBP	18.57	■□□□□ 0.56
SPIN3-238	ENST00000640421	MYRFL	Q96LU7	910 aa		18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms