RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ANKRD52Q8NB46 1076 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 LMO3Q8TAP4 145 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 CDK5RAP1Q96SZ6 601 aaKnown RBP18.67■□□□□ 0.58
PTPN11-207ENST00000639857 NACA2Q9H009 215 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 CCSER2Q9H7U1 834 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 SMPD4Q9NXE4 827 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 CFAP97Q9P2B7 532 aa18.67■□□□□ 0.58
PTPN11-207ENST00000639857 MYOFQ9NZM1 2061 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 CYP26A1O43174 497 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 LILRB5O75023 590 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 ATG13O75143 517 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 LMNAP02545 664 aaKnown RBP18.66■□□□□ 0.58
PTPN11-207ENST00000639857 PAEPP09466 180 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 HOXA6P31267 233 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 EIF2DP41214 584 aaKnown RBP18.66■□□□□ 0.58
PTPN11-207ENST00000639857 GOLGA8FQ08AF8 430 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 GOLGA8DPQ0D2H9 430 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 KCNH2Q12809 1159 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 GAS6Q14393 721 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 SMYD5Q6GMV2 418 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 ASCL5Q7RTU5 278 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 TTC16Q8NEE8 873 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 ATRIPQ8WXE1 791 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 CD101Q93033 1021 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 JAKMIP2Q96AA8 810 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 RBM12Q9NTZ6 932 aaKnown RBP18.66■□□□□ 0.58
PTPN11-207ENST00000639857 CLIC5Q9NZA1 410 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 R4GN57 208 aa18.66■□□□□ 0.58
PTPN11-207ENST00000639857 ZFHX2Q9C0A1 2572 aaPredicted RBP18.65■□□□□ 0.58
PTPN11-207ENST00000639857 ADH1CP00326 375 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 VDRP11473 427 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 ATP5C1P36542 298 aaKnown RBP18.65■□□□□ 0.58
PTPN11-207ENST00000639857 STILQ15468 1287 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 RAB41Q5JT25 222 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 Q6ZS52 159 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 ADGRG2Q8IZP9 1017 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 ARHGAP18Q8N392 663 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 PPM1KQ8N3J5 372 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 LINC00597Q9H2U6 94 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 HESX1Q9UBX0 185 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 DACH1Q9UI36 760 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 ATG2BQ96BY7 2078 aa18.65■□□□□ 0.58
PTPN11-207ENST00000639857 RIF1Q5UIP0 2472 aaKnown RBP18.64■□□□□ 0.58
PTPN11-207ENST00000639857 CHURC1-FNTBB4DL54 471 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 XPO1O14980 1071 aaKnown RBP18.64■□□□□ 0.57
PTPN11-207ENST00000639857 CYP17A1P05093 508 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 SETSIPP0DME0 302 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 RALAP11233 206 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 PRKCSHP14314 528 aaPredicted RBP18.64■□□□□ 0.57
PTPN11-207ENST00000639857 GALK1P51570 392 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 SATB1Q01826 763 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
PTPN11-207ENST00000639857 LRMPQ12912 555 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 DHCR24Q15392 516 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 PIGZQ86VD9 579 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 FAM81BQ96LP2 452 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 GBP4Q96PP9 640 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.64■□□□□ 0.57
PTPN11-207ENST00000639857 TSPAN16Q9UKR8 245 aa18.64■□□□□ 0.57
PTPN11-207ENST00000639857 O00370 1275 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 CD19P15391 556 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 PLA2G4AP47712 749 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 GOLGA7BQ2TAP0 167 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 CT47A1Q5JQC4 288 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-207ENST00000639857 TMEM270Q6UE05 265 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 TTC30AQ86WT1 665 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 CNOT6LQ96LI5 555 aaKnown RBP18.63■□□□□ 0.57
PTPN11-207ENST00000639857 KLF16Q9BXK1 252 aaPredicted RBP18.63■□□□□ 0.57
PTPN11-207ENST00000639857 EPC1Q9H2F5 836 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 OSER1Q9NX31 292 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 DNMT3LQ9UJW3 386 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 NAGPAQ9UK23 515 aa18.63■□□□□ 0.57
PTPN11-207ENST00000639857 A0A1W2PQH9 124 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 GTPBP10A4D1E9 387 aaKnown RBP18.62■□□□□ 0.57
PTPN11-207ENST00000639857 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.62■□□□□ 0.57
PTPN11-207ENST00000639857 K7ESF4 209 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 EGFP01133 1207 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 RARGP13631 454 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 ERCC5P28715 1186 aaPredicted RBP18.62■□□□□ 0.57
PTPN11-207ENST00000639857 CNR2P34972 360 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 OPRD1P41143 372 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 PGFP49763 221 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 GAB4Q2WGN9 574 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 PM20D1Q6GTS8 502 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 TSSK4Q6SA08 328 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 LCLAT1Q6UWP7 414 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 HTR3DQ70Z44 454 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 ENOSF1Q7L5Y1 443 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 FAM114A1Q8IWE2 563 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 SCML4Q8N228 414 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 KCTD13Q8WZ19 329 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 INTS2Q9H0H0 1204 aaKnown RBP18.62■□□□□ 0.57
PTPN11-207ENST00000639857 THAP9Q9H5L6 903 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 NMUR1Q9HB89 426 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 LMBRD1Q9NUN5 540 aa18.62■□□□□ 0.57
PTPN11-207ENST00000639857 LSM7Q9UK45 103 aaKnown RBP18.62■□□□□ 0.57
PTPN11-207ENST00000639857 CNTN6Q9UQ52 1028 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms