RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ADGRF2Q8IZF7 708 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 CACNA2D3Q8IZS8 1091 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 SLAIN1Q8ND83 568 aa15.77■□□□□ 0.11
TRIM3-215ENST00000639856 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.11
TRIM3-215ENST00000639856 TSPYL2Q9H2G4 693 aaPredicted RBP15.77■□□□□ 0.11
TRIM3-215ENST00000639856 C2CD4BA6NLJ0 364 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 TAF5Q15542 800 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 OR6B2Q6IFH4 312 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 FAM183BPQ6ZVS7 135 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 PCGF5Q86SE9 256 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 SH3TC2Q8TF17 1288 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 HSPH1Q92598 858 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 CABS1Q96KC9 395 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 ADAM2Q99965 735 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 PAAF1Q9BRP4 392 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 SNX25Q9H3E2 840 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 EURLQ9NYK6 297 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 NAALADL1Q9UQQ1 740 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 TMEM120BA0PK00 339 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 APOC4-APOC2K7ER74 178 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 MYCP01106 439 aaPredicted RBP15.76■□□□□ 0.11
TRIM3-215ENST00000639856 APOC2P02655 101 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 THP07101 528 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 CKBP12277 381 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 CREB1P16220 341 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 ADORA2BP29275 332 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 CLCNKBP51801 687 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 MBTPS1Q14703 1052 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 FAM26DQ5JW98 314 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 TRNP1Q6NT89 227 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 VSTM1Q6UX27 236 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 MRPL10Q7Z7H8 261 aaKnown RBP15.76■□□□□ 0.11
TRIM3-215ENST00000639856 RFX6Q8HWS3 928 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 HACE1Q8IYU2 909 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 RIBC1Q8N443 379 aaPredicted RBP15.76■□□□□ 0.11
TRIM3-215ENST00000639856 C3orf58Q8NDZ4 430 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 RXFP2Q8WXD0 754 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 PEBP4Q96S96 227 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 RSAD1Q9HA92 442 aa15.76■□□□□ 0.11
TRIM3-215ENST00000639856 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
TRIM3-215ENST00000639856 CASTOR2A6NHX0 329 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 HUS1O60921 280 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 GABBR2O75899 941 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 ENDOD1O94919 500 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 PDGFRAP16234 1089 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 LIG3P49916 1009 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 GDF10P55107 478 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 SH3PXD2AQ5TCZ1 1133 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 WSCD1Q658N2 575 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 TRAF7Q6Q0C0 670 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 CYP4V2Q6ZWL3 525 aaPredicted RBP15.75■□□□□ 0.11
TRIM3-215ENST00000639856 CENPUQ71F23 418 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 CYP4X1Q8N118 509 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 PRCCQ92733 491 aaPredicted RBP15.75■□□□□ 0.11
TRIM3-215ENST00000639856 CALN1Q9BXU9 219 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 STARD7Q9NQZ5 370 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 SLC38A7Q9NVC3 462 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 TBK1Q9UHD2 729 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 GIT1Q9Y2X7 761 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 TRIM17Q9Y577 477 aa15.75■□□□□ 0.11
TRIM3-215ENST00000639856 TDRD15B5MCY1 1934 aaKnown RBP15.75■□□□□ 0.11
TRIM3-215ENST00000639856 A0A0U1RQF3 1178 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 CYB561D2O14569 222 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ALOX15BO15296 676 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ATP2C2O75185 946 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 GRAP2O75791 330 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 IFNAR2P48551 515 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 PDE4CQ08493 712 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 FASTKD3Q14CZ7 662 aaKnown RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 CRYBG2Q8N1P7 616 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 RSAD2Q8WXG1 361 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 TSEN34Q9BSV6 310 aaKnown RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ACTL7BQ9Y614 415 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ZNF623O75123 536 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 POMCP01189 267 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 SETSIPP0DME0 302 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 BRAFP15056 766 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 TKTP29401 623 aaKnown RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 C15orf59Q2T9L4 293 aaPredicted RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 RNF187Q5TA31 235 aaPredicted RBP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 ARHGAP17Q68EM7 881 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 PPIL6Q8IXY8 311 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 LRRC34Q8IZ02 419 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 SLC35F5Q8WV83 523 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 PHACTR1Q9C0D0 580 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 C10orf88Q9H8K7 445 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.74■□□□□ 0.11
TRIM3-215ENST00000639856 HESX1Q9UBX0 185 aa15.74■□□□□ 0.11
TRIM3-215ENST00000639856 EXOC1LA0A1B0GW35 172 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 FOXO6A8MYZ6 492 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 CPP00450 1065 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 WARSP23381 471 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 YY1P25490 414 aa15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RDXP35241 583 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 RPL22P35268 128 aaKnown RBP15.73■□□□□ 0.11
TRIM3-215ENST00000639856 CDH6P55285 790 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms