RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 CGRRF1Q99675 332 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 SYBUQ9NX95 663 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 TTMPQ5BVD1 217 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 KYQ8NBH2 561 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ZNF446Q9NWS9 450 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 CRLS1Q9UJA2 301 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 OGTO15294 1046 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 RPS6KA5O75582 802 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 CYP24A1Q07973 514 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 SEC23AQ15436 765 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 SLFN11Q7Z7L1 901 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 FAM136AQ96C01 138 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 PCDH9Q9HC56 1237 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 STX7O15400 261 aaKnown RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 CBX6O95503 412 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ALDH5A1P51649 535 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 TRIM25Q14258 630 aaKnown RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 TBCELQ5QJ74 424 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 C10orf120Q5SQS8 335 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 LRCH1Q9Y2L9 728 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ELF3P78545 371 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 AGKQ53H12 422 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 N4BP2L1Q5TBK1 243 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 NOTUMQ6P988 496 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 DCP1BQ8IZD4 617 aaKnown RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 KAT2BQ92831 832 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 VPS9D1Q9Y2B5 631 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 FSBPO95073 299 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 RAG1P15918 1043 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ATP6AP1LQ52LC2 224 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 GLRA4Q5JXX5 417 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ARHGAP17Q68EM7 881 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 ZNF467Q7Z7K2 595 aaPredicted RBP19.06■□□□□ 0.64
SCARB2-213ENST00000638680 CREG2Q8IUH2 290 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 TRAPPC9Q96Q05 1148 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 PIF1Q9H611 641 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 STMN3Q9NZ72 180 aa19.06■□□□□ 0.64
SCARB2-213ENST00000638680 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 SREBF1P36956 1147 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 PNPLA4P41247 253 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ST3GAL1Q11201 340 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 Q4G0T1 1027 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ZSWIM2Q8NEG5 633 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ATG4CQ96DT6 458 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ZNRF3Q9ULT6 936 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 KRT87PA6NCN2 255 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 CSHL1Q14406 222 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 DGKDQ16760 1214 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 BNIPLQ7Z465 357 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 TMC2Q8TDI7 906 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 KCTD14Q9BQ13 255 aaPredicted RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 RNPEPQ9H4A4 650 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 RERGLQ9H628 205 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 RMND5AQ9H871 391 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 DDX18Q9NVP1 670 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 KLK14Q9P0G3 267 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 AP4E1Q9UPM8 1137 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 F8W810 466 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 NAT9Q9BTE0 207 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 UNKQ9C0B0 810 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 SCAF8Q9UPN6 1271 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 TOMM70O94826 608 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 GUCA1CO95843 209 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 GARTP22102 1010 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ELK3P41970 407 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 KRR1Q13601 381 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 LINC00116Q8NCU8 138 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 RBM46Q8TBY0 533 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ACTL9Q8TC94 416 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 TMEM39BQ9GZU3 492 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 TCF7L2Q9NQB0 619 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ACOT9Q9Y305 439 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 DNALI1O14645 258 aaPredicted RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ALDH1A1P00352 501 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 STK32AQ8WU08 396 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 SMAD5Q99717 465 aaKnown RBP19.05■□□□□ 0.64
SCARB2-213ENST00000638680 NCKIPSDQ9NZQ3 722 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 ARMCX1Q9P291 453 aa19.05■□□□□ 0.64
SCARB2-213ENST00000638680 NEXMIFQ5QGS0 1516 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 UBDO15205 165 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 CYP2C9P11712 490 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 PPP4CP60510 307 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 HPCAP84074 193 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 ATP1A4Q13733 1029 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 PGS1Q32NB8 556 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 MCOLN2Q8IZK6 566 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 APOPT1Q96IL0 206 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 CFAP99D6REC4 459 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 ICAM1P05362 532 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 RARAP10276 462 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 HARS2P49590 506 aaKnown RBP19.04■□□□□ 0.64
SCARB2-213ENST00000638680 TRAF2Q12933 501 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 EARS2Q5JPH6 523 aaKnown RBP19.04■□□□□ 0.64
SCARB2-213ENST00000638680 C11orf96Q7Z7L8 435 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 FUKQ8N0W3 1084 aa19.04■□□□□ 0.64
SCARB2-213ENST00000638680 SPIRE2Q8WWL2 714 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms