RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ADAM7Q9H2U9 754 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 RASAL2Q9UJF2 1139 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 KCNE1P15382 129 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 MAN1A1P33908 653 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 TRPC1P48995 793 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 ZNF268Q14587 947 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 CDO1Q16878 200 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 ERMARDQ5T6L9 678 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 FAM183BPQ6ZVS7 135 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 EXD1Q8NHP7 514 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 UBLCP1Q8WVY7 318 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 SEC14L1Q92503 715 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 SENP6Q9GZR1 1112 aaPredicted RBP12.03□□□□□ -0.48
CLN6-217ENST00000636964 LRRC19Q9H756 370 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 ABCF3Q9NUQ8 709 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 N6AMT1Q9Y5N5 214 aa12.03□□□□□ -0.48
CLN6-217ENST00000636964 A6NHS1 94 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 LRCH4O75427 683 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 ACAT1P24752 427 aaKnown RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 TAF6P49848 677 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 LILRA4P59901 499 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 TAP1Q03518 808 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 CACTIN-AS1Q8N1I8 211 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 APPL2Q8NEU8 664 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 SLITRK1Q96PX8 696 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 DCLK3Q9C098 648 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 SNX25Q9H3E2 840 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLN6-217ENST00000636964 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 ATP8A1Q9Y2Q0 1164 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 DYNLT1P63172 113 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 HTRA3P83110 453 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 KRT17Q04695 432 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 KLF1Q13351 362 aaPredicted RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 C15orf59Q2T9L4 293 aaPredicted RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 FAM133BQ5BKY9 247 aaKnown RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 XKR4Q5GH76 650 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 UBAP2Q5T6F2 1119 aaKnown RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 TRNP1Q6NT89 227 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 ARFGAP2Q8N6H7 521 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 CCDC63Q8NA47 563 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 GSTCDQ8NEC7 633 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 FMO2Q99518 471 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 SAE1Q9UBE0 346 aaPredicted RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 GGT7Q9UJ14 662 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 KIAA1257Q9ULG3 409 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 PADI3Q9ULW8 664 aa12.02□□□□□ -0.49
CLN6-217ENST00000636964 TIMM13Q9Y5L4 95 aaPredicted RBP12.02□□□□□ -0.49
CLN6-217ENST00000636964 XPOTO43592 962 aaKnown RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 TIMM44O43615 452 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 GABBR2O75899 941 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 TOMM70O94826 608 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 TUBP50607 506 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ATP11AP98196 1134 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 PIGWQ7Z7B1 504 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 CPLX4Q7Z7G2 160 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 RCOR2Q8IZ40 523 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 KLHDC9Q8NEP7 349 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ATXN2LQ8WWM7 1075 aaKnown RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 MCRS1Q96EZ8 462 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 RETREG1Q9H6L5 497 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 GRHL1Q9NZI5 618 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 WDR35Q9P2L0 1181 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 HESX1Q9UBX0 185 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 SRRDQ9UH36 339 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 CORO1CQ9ULV4 474 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 PODXLO00592 558 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 MGEA5O60502 916 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 HUS1O60921 280 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 CD48P09326 243 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 GABRB2P47870 512 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 BLMHQ13867 455 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 CCSAPQ6IQ19 270 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 ZDHHC24Q6UX98 284 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 OSTM1Q86WC4 334 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 RAET1EQ8TD07 263 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 HSPH1Q92598 858 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 TLCD1Q96CP7 247 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ZNF560Q96MR9 790 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 FAM129AQ9BZQ8 928 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ZDHHC18Q9NUE0 388 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ASIC3Q9UHC3 531 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 MYCP01106 439 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 MYCLP1P12525 358 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 PDGFRAP16234 1089 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 SCNN1GP51170 649 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 AGBL2Q5U5Z8 902 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 WSCD1Q658N2 575 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 SPOCD1Q6ZMY3 1216 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 ADGRF2Q8IZF7 708 aa12.01□□□□□ -0.49
CLN6-217ENST00000636964 C12orf50Q8NA57 414 aaPredicted RBP12.01□□□□□ -0.49
CLN6-217ENST00000636964 CLEC4CQ8WTT0 213 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms