RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TSTD1Q8NFU3 115 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 SMARCE1Q969G3 411 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 CYFIP2Q96F07 1278 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 PNKPQ96T60 521 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
PNKP-225ENST00000636214 CSNK1G1Q9HCP0 422 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 SEMA4GQ9NTN9 838 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 DLL3Q9NYJ7 618 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 IL37Q9NZH6 218 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 LSM7Q9UK45 103 aaKnown RBP18.94■□□□□ 0.62
PNKP-225ENST00000636214 PCDHA5Q9Y5H7 936 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 SPTBN2O15020 2390 aa18.94■□□□□ 0.62
PNKP-225ENST00000636214 TLR5O60602 858 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 CILPO75339 1184 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 ACO1P21399 889 aaKnown RBP18.93■□□□□ 0.62
PNKP-225ENST00000636214 OPRD1P41143 372 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 EIF2DP41214 584 aaKnown RBP18.93■□□□□ 0.62
PNKP-225ENST00000636214 GAD2Q05329 585 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 C2orf27AQ580R0 203 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 ZNF658Q5TYW1 1059 aaPredicted RBP18.93■□□□□ 0.62
PNKP-225ENST00000636214 CLEC20AQ6ZU45 233 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 TADA2BQ86TJ2 420 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 FMR1NBQ8N0W7 255 aaPredicted RBP18.93■□□□□ 0.62
PNKP-225ENST00000636214 ZMIZ2Q8NF64 920 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 PNPLA8Q9NP80 782 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 PARD6AQ9NPB6 346 aa18.93■□□□□ 0.62
PNKP-225ENST00000636214 FAM92AA1XBS5 289 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 SLC16A3O15427 465 aaKnown RBP18.92■□□□□ 0.62
PNKP-225ENST00000636214 BEST1O76090 585 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 ZDHHC11BP0C7U3 371 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 DGKEP52429 567 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 SLC8A3P57103 927 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 FKBP3Q00688 224 aaKnown RBP18.92■□□□□ 0.62
PNKP-225ENST00000636214 KDSRQ06136 332 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 ELF2Q15723 593 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 CSRP2Q16527 193 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 ZNF394Q53GI3 561 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 EEF2KMTQ96G04 330 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 FAXDC2Q96IV6 333 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 LOXL4Q96JB6 756 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 HEXIM2Q96MH2 286 aaKnown RBP18.92■□□□□ 0.62
PNKP-225ENST00000636214 TWNKQ96RR1 684 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 RTKNQ9BST9 563 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 ARHGEF4Q9NR80 690 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 SCML2Q9UQR0 700 aa18.92■□□□□ 0.62
PNKP-225ENST00000636214 ALDH1A2O94788 518 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 KAT7O95251 611 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 PRCPP42785 496 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 MRPS21P82921 87 aaKnown RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 ANO4Q32M45 955 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 LY6G5CQ5SRR4 150 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 RHBDF2Q6PJF5 856 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 PRR23CQ6ZRP0 262 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 TTC30AQ86WT1 665 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 C12orf50Q8NA57 414 aaPredicted RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 NETO1Q8TDF5 533 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 POLR3BQ9NW08 1133 aaPredicted RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 RAB20Q9NX57 234 aa18.91■□□□□ 0.62
PNKP-225ENST00000636214 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
PNKP-225ENST00000636214 KIAA1549LQ6ZVL6 1849 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 MYO18AQ92614 2054 aaKnown RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 K7EQS6 105 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 PSMA7O14818 248 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 CYP26A1O43174 497 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 RHOBTB1O94844 696 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 RALAP11233 206 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 TGM1P22735 817 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 HOXC13P31276 330 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 GRIA2P42262 883 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 PSEN1P49768 467 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 YWHAEP62258 255 aaKnown RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 AASDHQ4L235 1098 aaPredicted RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 USP39Q53GS9 565 aaKnown RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 KBTBD6Q86V97 674 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 C11orf74Q86VG3 221 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 CCDC33Q8N5R6 958 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 ZFRQ96KR1 1074 aaKnown RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 CDK5RAP1Q96SZ6 601 aaKnown RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 DUSP16Q9BY84 665 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 ARRDC1-AS1Q9H2J1 176 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 FAM124BQ9H5Z6 455 aaPredicted RBP18.9■□□□□ 0.62
PNKP-225ENST00000636214 SPHK2Q9NRA0 654 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 EBF1Q9UH73 591 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 NAGPAQ9UK23 515 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 MMP17Q9ULZ9 603 aa18.9■□□□□ 0.62
PNKP-225ENST00000636214 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 TBC1D3BA6NDS4 549 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 EPN2O95208 641 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 GBP1P32455 592 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 SLC6A11P48066 632 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 LRRC63Q05C16 580 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 GAB4Q2WGN9 574 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 HSF5Q4G112 596 aaPredicted RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 COBLL1Q53SF7 1204 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 C10orf120Q5SQS8 335 aa18.89■□□□□ 0.61
PNKP-225ENST00000636214 PPP1R26Q5T8A7 1209 aaPredicted RBP18.89■□□□□ 0.61
PNKP-225ENST00000636214 ANO7Q6IWH7 933 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms