RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 HESX1Q9UBX0 185 aa16.79■□□□□ 0.28
CHRNA4-211ENST00000628606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.79■□□□□ 0.28
CHRNA4-211ENST00000628606 MYO16Q9Y6X6 1858 aa16.79■□□□□ 0.28
CHRNA4-211ENST00000628606 ADH1CP00326 375 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 RALAP11233 206 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 KIF11P52732 1056 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 GAS6Q14393 721 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 ARHGAP17Q68EM7 881 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 GPRIN1Q7Z2K8 1008 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 ADGRG2Q8IZP9 1017 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 PPM1KQ8N3J5 372 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 ZBTB44Q8NCP5 570 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 SECISBP2LQ93073 1101 aaKnown RBP16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 OTUB2Q96DC9 234 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 CHFRQ96EP1 664 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 RAB23Q9ULC3 237 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 KIAA1257Q9ULG3 409 aa16.78■□□□□ 0.28
CHRNA4-211ENST00000628606 HHLA1C9JL84 531 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 CYP26A1O43174 497 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 EGFP01133 1207 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 IRF1P10914 325 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 KCNH2Q12809 1159 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 DHCR24Q15392 516 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 NELL1Q92832 810 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 CDK5RAP1Q96SZ6 601 aaKnown RBP16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 UBXN6Q9BZV1 441 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 LSM7Q9UK45 103 aaKnown RBP16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 SLC8A2Q9UPR5 921 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.28
CHRNA4-211ENST00000628606 EP300Q09472 2414 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 A0A1W2PQH9 124 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 SCAMP3O14828 347 aaKnown RBP16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 RNF40O75150 1001 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 PAPSS2O95340 614 aaPredicted RBP16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 AFPP02771 609 aaKnown RBP16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 CYP17A1P05093 508 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 VDRP11473 427 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 RARGP13631 454 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 BCAT1P54687 386 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 C10orf120Q5SQS8 335 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 BTBD8Q5XKL5 378 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 CCDC186Q7Z3E2 898 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 ARHGAP18Q8N392 663 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 MLKLQ8NB16 471 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 DNMT3LQ9UJW3 386 aa16.76■□□□□ 0.27
CHRNA4-211ENST00000628606 MYOFQ9NZM1 2061 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 LILRB5O75023 590 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 TBX18O95935 607 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 ADH5P11766 374 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 MARSP56192 900 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 GAD2Q05329 585 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 BST2Q10589 180 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 GOLGA7BQ2TAP0 167 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 PREPLQ4J6C6 727 aaPredicted RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 HEATR6Q6AI08 1181 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 RUBCNQ92622 972 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 ACDQ96AP0 544 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 ZFRQ96KR1 1074 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 CLSTN2Q9H4D0 955 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 LRRC4Q9HBW1 653 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 NCDNQ9UBB6 729 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 TSPAN16Q9UKR8 245 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 USP3Q9Y6I4 520 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 DMDP11532 3685 aa16.75■□□□□ 0.27
CHRNA4-211ENST00000628606 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 CHURC1-FNTBB4DL54 471 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 PAEPP09466 180 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 TDGF1P13385 188 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 CNR2P34972 360 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 FNTBP49356 437 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 PGFP49763 221 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 LY6G5CQ5SRR4 150 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 NAIF1Q69YI7 327 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 KLHDC10Q6PID8 442 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 RHBDF2Q6PJF5 856 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 NUDT18Q6ZVK8 323 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 RSRC2Q7L4I2 434 aaKnown RBP16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 PIGZQ86VD9 579 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 LONP2Q86WA8 852 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 RPLP0P6Q8NHW5 317 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 IPO9Q96P70 1041 aaKnown RBP16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 PNKPQ96T60 521 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 KLF16Q9BXK1 252 aaPredicted RBP16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 EPC1Q9H2F5 836 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 NMUR1Q9HB89 426 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 CLIC5Q9NZA1 410 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 DACH1Q9UI36 760 aa16.74■□□□□ 0.27
CHRNA4-211ENST00000628606 CFAP54Q96N23 3096 aa16.73■□□□□ 0.27
CHRNA4-211ENST00000628606 XPO1O14980 1071 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms