RNA–Protein interactions for RNA: ENST00000625810.2

ATG4B-226, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4 BASIC

Gene ATG4B, Length 370 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-226ENST00000625810 CNTNAP3BQ96NU0 1288 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 CNTNAP3Q9BZ76 1288 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 DNAI2Q9GZS0 605 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 CYP3A43Q9HB55 503 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 GDPD2Q9HCC8 539 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 EBF1Q9UH73 591 aa20.3■□□□□ 0.84
ATG4B-226ENST00000625810 ADRB1P08588 477 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 ZNF806P0C7X5 589 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 TUBP50607 506 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 LIMK1P53667 647 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 PPP3CAQ08209 521 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 PLK5Q496M5 336 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 AASDHQ4L235 1098 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-226ENST00000625810 PLA2G2CQ5R387 149 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 CCDC33Q8N5R6 958 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 C12orf50Q8NA57 414 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-226ENST00000625810 TAS1R2Q8TE23 839 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 JAKMIP2Q96AA8 810 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 OTUB2Q96DC9 234 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 CYFIP2Q96F07 1278 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 NT5C1AQ9BXI3 368 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 CSNK1G1Q9HCP0 422 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 TLR8Q9NR97 1041 aaKnown RBP20.29■□□□□ 0.84
ATG4B-226ENST00000625810 RXFP3Q9NSD7 469 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 PCDHGA5Q9Y5G8 931 aa20.29■□□□□ 0.84
ATG4B-226ENST00000625810 FAM92AA1XBS5 289 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 ANTXRLA6NF34 631 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 DCLK1O15075 740 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 ZDHHC11BP0C7U3 371 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 IRF1P10914 325 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 CD58P19256 250 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 EIF2DP41214 584 aaKnown RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 MRPS21P82921 87 aaKnown RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 GAD2Q05329 585 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 ELF2Q15723 593 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 LY6G5CQ5SRR4 150 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 BTBD8Q5XKL5 378 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 ZFRQ96KR1 1074 aaKnown RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 TWNKQ96RR1 684 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 HNRNPABQ99729 332 aaKnown RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 NIF3L1Q9GZT8 377 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 DUSP15Q9H1R2 295 aaPredicted RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 SMOC1Q9H4F8 434 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 APOBEC3GQ9HC16 384 aaKnown RBP20.28■□□□□ 0.84
ATG4B-226ENST00000625810 ARHGEF4Q9NR80 690 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 CHD8Q9HCK8 2581 aa20.28■□□□□ 0.84
ATG4B-226ENST00000625810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.27■□□□□ 0.84
ATG4B-226ENST00000625810 TLR5O60602 858 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 RHOBTB1O94844 696 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 KAT7O95251 611 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 GBP1P32455 592 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 MPLP40238 635 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 ENPEPQ07075 957 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 INCA1Q0VD86 236 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 USP39Q53GS9 565 aaKnown RBP20.27■□□□□ 0.84
ATG4B-226ENST00000625810 C12orf40Q86WS4 652 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 TTC30AQ86WT1 665 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 TMEM8AQ9HCN3 771 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 MMP17Q9ULZ9 603 aa20.27■□□□□ 0.84
ATG4B-226ENST00000625810 GOLGA6L4A6NEF3 574 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 CETN3O15182 167 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 CHRM1P11229 460 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-226ENST00000625810 ACO1P21399 889 aaKnown RBP20.26■□□□□ 0.83
ATG4B-226ENST00000625810 GTF2H1P32780 548 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 TIE1P35590 1138 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 GRIA2P42262 883 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 KDSRQ06136 332 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 MESP2Q0VG99 397 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 ANO4Q32M45 955 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 KRT39Q6A163 491 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 ANO7Q6IWH7 933 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 CLEC20AQ6ZU45 233 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 SFTPA1Q8IWL2 248 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 BBS7Q8IWZ6 715 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 SMYD4Q8IYR2 804 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-226ENST00000625810 NAT16Q8N8M0 369 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 TPSD1Q9BZJ3 242 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 INVSQ9Y283 1065 aa20.26■□□□□ 0.83
ATG4B-226ENST00000625810 KMT2BQ9UMN6 2715 aaPredicted RBP20.26■□□□□ 0.83
ATG4B-226ENST00000625810 CILPO75339 1184 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 ALDH1A2O94788 518 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 KLF8O95600 359 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-226ENST00000625810 EPB41P11171 864 aaKnown RBP20.25■□□□□ 0.83
ATG4B-226ENST00000625810 ATP5C1P36542 298 aaKnown RBP20.25■□□□□ 0.83
ATG4B-226ENST00000625810 PGFP49763 221 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 GOLGA8FQ08AF8 430 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 GOLGA8DPQ0D2H9 430 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 PNOCQ13519 176 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 CRY1Q16526 586 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 PREPLQ4J6C6 727 aaPredicted RBP20.25■□□□□ 0.83
ATG4B-226ENST00000625810 ZCWPW2Q504Y3 356 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 IL31Q6EBC2 164 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 ALLCQ8N6M5 410 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 TXNDC5Q8NBS9 432 aaKnown RBP20.25■□□□□ 0.83
ATG4B-226ENST00000625810 EEF2KMTQ96G04 330 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 SPHK2Q9NRA0 654 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 VPS45Q9NRW7 570 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 RMND1Q9NWS8 449 aa20.25■□□□□ 0.83
ATG4B-226ENST00000625810 SCML2Q9UQR0 700 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms