RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PQLC1Q8N2U9 271 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 MARVELD2Q8N4S9 558 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 STRA6Q9BX79 667 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 RBM38Q9H0Z9 239 aaKnown RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 IP6K2Q9UHH9 426 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 BARX2Q9UMQ3 279 aaPredicted RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 WNK3Q9BYP7 1800 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 UTRNP46939 3433 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 A0A1B0GTW7 788 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 BTBD19C9JJ37 291 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 TBC1D12O60347 775 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 F7P08709 466 aaPredicted RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 AOC1P19801 751 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 GMPRP36959 345 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 MAPK10P53779 464 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 MRPS22P82650 360 aaKnown RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 MROH9Q5TGP6 573 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 TTC39BQ5VTQ0 682 aaPredicted RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 PATL1Q86TB9 770 aaKnown RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 DCUN1D5Q9BTE7 237 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 XPNPEP1Q9NQW7 623 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 PCDHB4Q9Y5E5 795 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 SCINQ9Y6U3 715 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 TAF1LQ8IZX4 1826 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 IRS2Q9Y4H2 1338 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 TMEM221A6NGB7 291 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 SDR42E2A6NKP2 422 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 SNRPAP09012 282 aaKnown RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 RARS2Q5T160 578 aaKnown RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 C16orf46Q6P387 395 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 DRICH1Q6PGQ1 229 aaPredicted RBP15.75■□□□□ 0.11
PMS1-221ENST00000624204 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 RIN3Q8TB24 985 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 THEGQ9P2T0 379 aa15.75■□□□□ 0.11
PMS1-221ENST00000624204 TRIM43BA6NCK2 446 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 HLA-DOAP06340 250 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 FAM58BPP0C7Q3 252 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 BRDTQ58F21 947 aaPredicted RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 ZNF410Q86VK4 478 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 SLC26A11Q86WA9 606 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 UNC45BQ8IWX7 931 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 NKD2Q969F2 451 aaPredicted RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 MKL1Q969V6 931 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 PARVAQ9NVD7 372 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 KCND2Q9NZV8 630 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 AP1G1O43747 822 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 UGT1A9O60656 530 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 SIN3BO75182 1162 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 CDH2P19022 906 aaPredicted RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 TNNI1P19237 187 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 GNA15P30679 374 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 ECE1P42892 770 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 MRPS5P82675 430 aaKnown RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 WDR44Q5JSH3 913 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 VWA5B1Q5TIE3 1220 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 SMYD1Q8NB12 490 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 CCT7Q99832 543 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 COPS7BQ9H9Q2 264 aaPredicted RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 UGT1A7Q9HAW7 530 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 UGT1A10Q9HAW8 530 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 UGT1A8Q9HAW9 530 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 ZNRF3Q9ULT6 936 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 GNEQ9Y223 722 aaKnown RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 SF3B1O75533 1304 aaKnown RBP eCLIP15.74■□□□□ 0.115e-8■■■■■ 189.5
PMS1-221ENST00000624204 GPSM2P81274 684 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 GIPC3Q8TF64 312 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
PMS1-221ENST00000624204 HERC5Q9UII4 1024 aaKnown RBP15.74■□□□□ 0.11
PMS1-221ENST00000624204 CXorf49A8MYA2 514 aaPredicted RBP15.73■□□□□ 0.11
PMS1-221ENST00000624204 KLHL2O95198 593 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 PDGFRBP09619 1106 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 NR1H2P55055 460 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 NOMO3P69849 1222 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 ZFPM1Q8IX07 1006 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 TEKT1Q969V4 418 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 H3BNX3 289 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 ITM2AO43736 263 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 ENTPD1P49961 510 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 RPL10AP62906 217 aaKnown RBP15.73■□□□□ 0.11
PMS1-221ENST00000624204 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 TEX44Q53QW1 395 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 FRMD7Q6ZUT3 714 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 SH2D5Q6ZV89 423 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 LPCAT2Q7L5N7 544 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 MIER3Q7Z3K6 550 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 TMIGD2Q96BF3 282 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 PPP1R14BQ96C90 147 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 ATXN7L3BQ96GX2 97 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 TEKT3Q9BXF9 490 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 RRN3Q9NYV6 651 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 RSL24D1Q9UHA3 163 aaKnown RBP15.73■□□□□ 0.11
PMS1-221ENST00000624204 PCDHAC2Q9Y5I4 1007 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 NFASCO94856 1347 aa15.73■□□□□ 0.11
PMS1-221ENST00000624204 RBM47A0AV96 593 aaKnown RBP15.72■□□□□ 0.11
PMS1-221ENST00000624204 DCXO43602 365 aa15.72■□□□□ 0.11
PMS1-221ENST00000624204 RAD17O75943 681 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms