RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 HES2Q9Y543 173 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 CFHP08603 1231 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 AMPD1P23109 780 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 ACADSBP45954 432 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 TAF6P49848 677 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 RASA2Q15283 850 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 MYLK4Q86YV6 388 aaPredicted RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 C12orf29Q8N999 325 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 SRPK1Q96SB4 655 aaKnown RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 TASP1Q9H6P5 420 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 ADA2Q9NZK5 511 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 UBQLN1Q9UMX0 589 aaKnown RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 DRG1Q9Y295 367 aaKnown RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 TM9SF1O15321 606 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 PAEPP09466 180 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
MSH6-215ENST00000622629 CYP2B6P20813 491 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 CCL15Q16663 113 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 FAM182AQ5T1J6 154 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 KLC3Q6P597 504 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 ZCCHC23Q6ZST2 131 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 TRABD2AQ86V40 505 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 ASB7Q9H672 318 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 SLC39A10Q9ULF5 831 aa13.31□□□□□ -0.28
MSH6-215ENST00000622629 MYH14Q7Z406 1995 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 ZNF536O15090 1300 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 C3orf70A6NLC5 250 aaPredicted RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 KCNK1O00180 336 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 AIM2O14862 343 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 CYP2C8P10632 490 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 ACAT1P24752 427 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 ATICP31939 592 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 SPRP35270 261 aaPredicted RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 COG7P83436 770 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 MFSD5Q6N075 450 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 CES3Q6UWW8 571 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 KIAA0319LQ8IZA0 1049 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 TRPM4Q8TD43 1214 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 IRS2Q9Y4H2 1338 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 ENO4A6NNW6 628 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 AVILO75366 819 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 MCF2P10911 925 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 UNGP13051 313 aaPredicted RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 PAMP19021 973 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 PAN2Q504Q3 1202 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 KCNT2Q6UVM3 1135 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 BBS12Q6ZW61 710 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 SGF29Q96ES7 293 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 C12orf65Q9H3J6 166 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 TUBGCP6Q96RT7 1819 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 USP54Q70EL1 1684 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 SDR42E2A6NKP2 422 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 MYCP01106 439 aaPredicted RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 PTPN4P29074 926 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 NUMBP49757 651 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 EFTUD2Q15029 972 aaKnown RBP eCLIP13.3□□□□□ -0.282e-7■■■□□ 17.5
MSH6-215ENST00000622629 DNAL1Q4LDG9 190 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 BTBD8Q5XKL5 378 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 MOB2Q70IA6 237 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 CPXM1Q96SM3 734 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 BATF3Q9NR55 127 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 UBP1Q9NZI7 540 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 NOL3O60936 208 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 MTA2O94776 668 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 TSPY1Q01534 308 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 RAB44Q7Z6P3 723 aaPredicted RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 IPMKQ8NFU5 416 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 VPS33BQ9H267 617 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 MROH8Q9H579 483 aa13.3□□□□□ -0.28
MSH6-215ENST00000622629 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
MSH6-215ENST00000622629 FARP2O94887 1054 aaPredicted RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 ITGAVP06756 1048 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 FAM200BP0CF97 657 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 ENO3P13929 434 aaPredicted RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 BCAT1P54687 386 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 MAP7Q14244 749 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 SPOUT1Q5T280 376 aaKnown RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 MTHFD1LQ6UB35 978 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 TEX9Q8N6V9 391 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 NETO2Q8NC67 525 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 DLGAP2Q9P1A6 1054 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 DNAJC16Q9Y2G8 782 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 FCHO1O14526 889 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 SKAP2O75563 359 aaPredicted RBP13.29□□□□□ -0.28
MSH6-215ENST00000622629 DGKIO75912 1065 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 KRT16P08779 473 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 TGM2P21980 687 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 PRAMEP78395 509 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 CRADDP78560 199 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 PCSK7Q16549 785 aa13.29□□□□□ -0.28
MSH6-215ENST00000622629 SV2CQ496J9 727 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms