RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TMEM110Q86TL2 294 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 VSTM4Q8IW00 320 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 SCUBE3Q8IX30 993 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 SLC44A3Q8N4M1 653 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 E2F7Q96AV8 911 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 PPP1R13BQ96KQ4 1090 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 NACA2Q9H009 215 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 RNF38Q9H0F5 515 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 CCSER2Q9H7U1 834 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 CYLDQ9NQC7 956 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 TDP1Q9NUW8 608 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 OSER1Q9NX31 292 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 MUTYHQ9UIF7 546 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 CAPN11Q9UMQ6 739 aa19.52■□□□□ 0.72
CIRBP-245ENST00000621399 LUC7L2Q9Y383 392 aaKnown RBP19.52■□□□□ 0.72
CIRBP-245ENST00000621399 BDP1A6H8Y1 2624 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 HEPACAM2A8MVW5 462 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 E5RJQ4 531 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 COCHO43405 550 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 LSM8O95777 96 aaKnown RBP19.51■□□□□ 0.71
CIRBP-245ENST00000621399 GYPCP04921 128 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 RALAP11233 206 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 RARGP13631 454 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 CHRNB2P17787 502 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 SNX16P57768 344 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 DAOAP59103 153 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 ZBED6P86452 979 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 SCML4Q8N228 414 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 CELF5Q8N6W0 485 aaKnown RBP19.51■□□□□ 0.71
CIRBP-245ENST00000621399 IRGQQ8WZA9 623 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 USP13Q92995 863 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-245ENST00000621399 AGPAT1Q99943 283 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 PLA2G2FQ9BZM2 168 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 NUCKS1Q9H1E3 243 aaKnown RBP19.51■□□□□ 0.71
CIRBP-245ENST00000621399 SYNCQ9H7C4 482 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 CLIC5Q9NZA1 410 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 AIPL1Q9NZN9 384 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 SORCS3Q9UPU3 1222 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 GREB1Q4ZG55 1949 aa19.51■□□□□ 0.71
CIRBP-245ENST00000621399 MYH10P35580 1976 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 YJEFN3A6XGL0 299 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 E7ENQ6 273 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 TLR5O60602 858 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 OLFM2O95897 454 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 MBL2P11226 248 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-245ENST00000621399 CASP14P31944 242 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 CDH5P33151 784 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-245ENST00000621399 FMO1Q01740 532 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 BTBD8Q5XKL5 378 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 TADA2BQ86TJ2 420 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 TTC16Q8NEE8 873 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 CLEC4CQ8WTT0 213 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 GOLGA1Q92805 767 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 RSPRY1Q96DX4 576 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 CPXM1Q96SM3 734 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 SEPT11Q9NVA2 429 aaKnown RBP19.5■□□□□ 0.71
CIRBP-245ENST00000621399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.5■□□□□ 0.71
CIRBP-245ENST00000621399 OBP2AQ9NY56 170 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 CCL26Q9Y258 94 aa19.5■□□□□ 0.71
CIRBP-245ENST00000621399 PATJQ8NI35 1801 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 DOCK8Q8NF50 2099 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 FAM170AA1A519 330 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 SART1O43290 800 aaKnown RBP19.49■□□□□ 0.71
CIRBP-245ENST00000621399 TBX18O95935 607 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 ATP5C1P36542 298 aaKnown RBP19.49■□□□□ 0.71
CIRBP-245ENST00000621399 SLC7A9P82251 487 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 TRIM14Q14142 442 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 GRM2Q14416 872 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 ZNF268Q14587 947 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-245ENST00000621399 C10orf120Q5SQS8 335 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 NAA35Q5VZE5 725 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 BSPRYQ5W0U4 402 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 VITQ6UXI7 678 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 TRIM72Q6ZMU5 477 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 BHLHA9Q7RTU4 235 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 MFSD6LQ8IWD5 586 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 YAF2Q8IY57 180 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 IPO4Q8TEX9 1081 aaKnown RBP19.49■□□□□ 0.71
CIRBP-245ENST00000621399 CPA5Q8WXQ8 436 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 CDK5RAP1Q96SZ6 601 aaKnown RBP19.49■□□□□ 0.71
CIRBP-245ENST00000621399 KIF9Q9HAQ2 790 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 SMPD4Q9NXE4 827 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 TJP2Q9UDY2 1190 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 NUDT5Q9UKK9 219 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 ARHGAP26Q9UNA1 814 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 CPQQ9Y646 472 aa19.49■□□□□ 0.71
CIRBP-245ENST00000621399 TNFRSF10AO00220 468 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 PAPSS1O43252 624 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 CYP1A1P04798 512 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 TPM1P09493 284 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 PSMC3P17980 439 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 ZNF75DP51815 510 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 NOMO3P69849 1222 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 KLHL30Q0D2K2 578 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 PTPN20Q4JDL3 420 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 E4F1Q66K89 784 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 RSRC2Q7L4I2 434 aaKnown RBP19.48■□□□□ 0.71
CIRBP-245ENST00000621399 ERICH1Q86X53 443 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 MSANTD4Q8NCY6 345 aa19.48■□□□□ 0.71
CIRBP-245ENST00000621399 BPIFB1Q8TDL5 484 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms