RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PCDHGC3Q9UN70 934 aa19.23■□□□□ 0.67
LITAF-220ENST00000620789 KIF26AQ9ULI4 1882 aaPredicted RBP19.22■□□□□ 0.67
LITAF-220ENST00000620789 A0A1W2PQC6 194 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 FAM86C2PA6NEL3 165 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 CHADO15335 359 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 TLR5O60602 858 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 ZNF445P59923 1031 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 USP4Q13107 963 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 NR1I3Q14994 352 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 ZNF77Q15935 545 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 ARHGAP29Q52LW3 1261 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 SCML4Q8N228 414 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 ARHGAP18Q8N392 663 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 RIN3Q8TB24 985 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 SH3RF2Q8TEC5 729 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 STK32AQ8WU08 396 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 DNASE1L2Q92874 299 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 SPAG5Q96R06 1193 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 CNGB3Q9NQW8 809 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.22■□□□□ 0.67
LITAF-220ENST00000620789 THG1LQ9NWX6 298 aaKnown RBP19.22■□□□□ 0.67
LITAF-220ENST00000620789 CLIC5Q9NZA1 410 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 CPQQ9Y646 472 aa19.22■□□□□ 0.67
LITAF-220ENST00000620789 ARNTLO00327 626 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 GABBR2O75899 941 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 MBL2P11226 248 aaPredicted RBP19.21■□□□□ 0.67
LITAF-220ENST00000620789 RARGP13631 454 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 LCP1P13796 627 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 CYP11B1P15538 503 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 KRT9P35527 623 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 SOX5P35711 763 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 RPL34P49207 117 aaKnown RBP19.21■□□□□ 0.67
LITAF-220ENST00000620789 ZXDBP98169 803 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 PLCB2Q00722 1185 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 TMEM31Q5JXX7 168 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 BHLHA9Q7RTU4 235 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 SIX5Q8N196 739 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 ZNF276Q8N554 614 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 NACA2Q9H009 215 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 LHX5Q9H2C1 402 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 TRPV5Q9NQA5 729 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 ARHGEF3Q9NR81 526 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 ST7Q9NRC1 585 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 CA14Q9ULX7 337 aa19.21■□□□□ 0.67
LITAF-220ENST00000620789 COL4A2P08572 1712 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 PRR33A8MZF0 331 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 LEFTY2O00292 366 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 PIK3R2O00459 728 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 GFPT2O94808 682 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 RALAP11233 206 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 STAT1P42224 750 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 DAOAP59103 153 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 YWHAGP61981 247 aaKnown RBP eCLIP19.2■□□□□ 0.66
LITAF-220ENST00000620789 MTF1Q14872 753 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 KLHDC10Q6PID8 442 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 TADA2BQ86TJ2 420 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 PASD1Q8IV76 773 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 TTC16Q8NEE8 873 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 ZFYVE19Q96K21 471 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 ZFRQ96KR1 1074 aaKnown RBP19.2■□□□□ 0.66
LITAF-220ENST00000620789 CDK5RAP1Q96SZ6 601 aaKnown RBP19.2■□□□□ 0.66
LITAF-220ENST00000620789 SLC4A5Q9BY07 1137 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 SMPD4Q9NXE4 827 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 CYTH4Q9UIA0 394 aa19.2■□□□□ 0.66
LITAF-220ENST00000620789 KRBA1A5PL33 1030 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 FBXO21O94952 628 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 TBX18O95935 607 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 ATP5C1P36542 298 aaKnown RBP19.19■□□□□ 0.66
LITAF-220ENST00000620789 ACADSBP45954 432 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 UBASH3AP57075 661 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 PDCLQ13371 301 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 SLC44A4Q53GD3 710 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 IER5LQ5T953 404 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 CC2D1AQ6P1N0 951 aaPredicted RBP19.19■□□□□ 0.66
LITAF-220ENST00000620789 CACNA2D4Q7Z3S7 1137 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 BMP8AQ7Z5Y6 402 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 NOP9Q86U38 636 aaKnown RBP19.19■□□□□ 0.66
LITAF-220ENST00000620789 DDX42Q86XP3 938 aaKnown RBP eCLIP19.19■□□□□ 0.66
LITAF-220ENST00000620789 WDTC1Q8N5D0 677 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 EPS8L1Q8TE68 723 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 IRGQQ8WZA9 623 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 DDX1Q92499 740 aaKnown RBP19.19■□□□□ 0.66
LITAF-220ENST00000620789 NDRG1Q92597 394 aaKnown RBP19.19■□□□□ 0.66
LITAF-220ENST00000620789 PBXIP1Q96AQ6 731 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
LITAF-220ENST00000620789 YJEFN3A6XGL0 299 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 E7ENQ6 273 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 PDGFBP01127 241 aaPredicted RBP19.18■□□□□ 0.66
LITAF-220ENST00000620789 MLF2Q15773 248 aaPredicted RBP19.18■□□□□ 0.66
LITAF-220ENST00000620789 C10orf120Q5SQS8 335 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 HFE2Q6ZVN8 426 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 TMEM110Q86TL2 294 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 KIAA1958Q8N8K9 716 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 RNF214Q8ND24 703 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 CSGALNACT1Q8TDX6 532 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 OSCP1Q8WVF1 389 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 NOX5Q96PH1 765 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 FAM83CQ9BQN1 747 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 MIS12Q9H081 205 aa19.18■□□□□ 0.66
LITAF-220ENST00000620789 PDCL3Q9H2J4 239 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms