RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CLEC16AQ2KHT3 1053 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 EML3Q32P44 896 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC39A4Q6P5W5 647 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TAS1R3Q7RTX0 852 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PCGF5Q86SE9 256 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 TRABD2AQ86V40 505 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CTAGE3PQ8IX95 158 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PDIK1LQ8N165 341 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 ALKBH8Q96BT7 664 aaKnown RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 NSL1Q96IY1 281 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 FDXACB1Q9BRP7 624 aaPredicted RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 GPR88Q9GZN0 384 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 SYNCQ9H7C4 482 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 KIAA1586Q9HCI6 787 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 RBAKQ9NYW8 714 aaPredicted RBP7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 HEY2Q9UBP5 337 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 PRKAG3Q9UGI9 489 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 CHKBQ9Y259 395 aa7.29□□□□□ -1.24
SRGAP3-213ENST00000618999 MAGEA13PA6NCF6 341 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 GOLGA8RI6L899 631 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ADCY6O43306 1168 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 EXTL3O43909 919 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 OPHN1O60890 802 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PROSCO94903 275 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 LDHAP00338 332 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF865P0CJ78 1059 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 AKR1A1P14550 325 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PECAM1P16284 738 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 RPA3P35244 121 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 GEMIN4P57678 1058 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 HTRA3P83110 453 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ROR2Q01974 943 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PRKCZQ05513 592 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CFAP157Q5JU67 520 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 LGSNQ5TDP6 509 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CPNE8Q86YQ8 564 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 TTC8Q8TAM2 541 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 SHC3Q92529 594 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ALG13Q9NP73 1137 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 TOPORSQ9NS56 1045 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ETAA1Q9NY74 926 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 NKX1-2Q9UD57 310 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC24A2Q9UI40 661 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PCDHB2Q9Y5E7 798 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 A0A0G2JMZ2 1700 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 DOCK3Q8IZD9 2030 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNFX1Q9P2E3 1918 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 LPXNO60711 386 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PEX11AO75192 247 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 C22orf31O95567 290 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 NUDT7P0C024 238 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 YWHAGP61981 247 aaKnown RBP eCLIP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CUL3Q13618 768 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MPP2Q14168 576 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PDCD2Q16342 344 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 FSCN1Q16658 493 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF568Q3ZCX4 644 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 TRIM72Q6ZMU5 477 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 TRIM42Q8IWZ5 723 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGAP18Q8N392 663 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF75CPQ92670 426 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 EMID1Q96A84 441 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 HHIPL1Q96JK4 782 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM84AQ96KN4 292 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CENPKQ9BS16 269 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MANSC1Q9H8J5 431 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MTO1Q9Y2Z2 717 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGAP42A6NI28 874 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 DNALI1O14645 258 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 UPP2O95045 317 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PGK1P00558 417 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 FESP07332 822 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CYP2C9P11712 490 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 ELNP15502 786 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 CTGFP29279 349 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 SOX11P35716 441 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 WDR4P57081 412 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 DYNLT1P63172 113 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 NFX1Q12986 1120 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 LRRC23Q53EV4 343 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 C2CD6Q53TS8 623 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 DNAJC24Q6P3W2 148 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MTHFD1LQ6UB35 978 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 RCOR2Q8IZ40 523 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MCOLN2Q8IZK6 566 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 C7orf31Q8N865 590 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 BTBD10Q9BSF8 475 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 SYT11Q9BT88 431 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 AVENQ9NQS1 362 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PDP2Q9P2J9 529 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 PPARGC1AQ9UBK2 798 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 IP6K2Q9UHH9 426 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 NOCTQ9UK39 431 aaKnown RBP7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 C2CD2Q9Y426 696 aa7.28□□□□□ -1.24
SRGAP3-213ENST00000618999 MYH11P35749 1972 aa7.27□□□□□ -1.24
SRGAP3-213ENST00000618999 CCDC160A6NGH7 325 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms