RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RXRBP28702 533 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 MAPK4P31152 587 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 CLPPQ16740 277 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 UBE2SQ16763 222 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 KIAA1958Q8N8K9 716 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 RPAP3Q9H6T3 665 aaPredicted RBP12.72□□□□□ -0.37
MATR3-227ENST00000618441 ZNF304Q9HCX3 659 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 SLC38A7Q9NVC3 462 aa12.72□□□□□ -0.37
MATR3-227ENST00000618441 A0A0A6YYK5 440 aaPredicted RBP12.71□□□□□ -0.37
MATR3-227ENST00000618441 E2F8A0AVK6 867 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 ANKRD34BA5PLL1 514 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 PPATQ06203 517 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 PQLC1Q8N2U9 271 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 DENND1AQ8TEH3 1009 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 SCFD1Q8WVM8 642 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 KCTD5Q9NXV2 234 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 SATB2Q9UPW6 733 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 BHMG1C9JSJ3 638 aaPredicted RBP12.71□□□□□ -0.37
MATR3-227ENST00000618441 STMND1H3BQB6 276 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 CYB561D2O14569 222 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 MAGEB2O15479 319 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 KCNH1O95259 989 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 CALCAP01258 141 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 PRKACBP22694 351 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 IL6STP40189 918 aaPredicted RBP12.71□□□□□ -0.37
MATR3-227ENST00000618441 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 ZNF512BQ96KM6 892 aaPredicted RBP12.71□□□□□ -0.37
MATR3-227ENST00000618441 PAFAH2Q99487 392 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.71□□□□□ -0.378e-6■■■□□ 18.6
MATR3-227ENST00000618441 MAFFQ9ULX9 164 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 APOBEC2Q9Y235 224 aaKnown RBP12.71□□□□□ -0.37
MATR3-227ENST00000618441 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
MATR3-227ENST00000618441 CIAO1O76071 339 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 MFN2O95140 757 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 SLC5A1P13866 664 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 ENO3P13929 434 aaPredicted RBP12.71□□□□□ -0.38
MATR3-227ENST00000618441 CASP7P55210 303 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 NPEPPSP55786 919 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 FLOT2Q14254 428 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 NANOGP8Q6NSW7 305 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 PASD1Q8IV76 773 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 WARS2Q9UGM6 360 aaKnown RBP12.71□□□□□ -0.38
MATR3-227ENST00000618441 POMPQ9Y244 141 aa12.71□□□□□ -0.38
MATR3-227ENST00000618441 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 GNA11P29992 359 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 DNAJA1P31689 397 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 IST1P53990 364 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 MRPS15P82914 257 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 BST1Q10588 318 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 FAPQ12884 760 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 CCNIQ14094 377 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 SETD3Q86TU7 594 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 OSCP1Q8WVF1 389 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 RMND5BQ96G75 393 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 MMP19Q99542 508 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 AGPAT1Q99943 283 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 MAN1C1Q9NR34 630 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 SENP1Q9P0U3 644 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 LGALS13Q9UHV8 139 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 STRIP2Q9ULQ0 834 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 MRPL42Q9Y6G3 142 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 STRCQ7RTU9 1775 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 PLA2G4BP0C869 781 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 ARPP19P56211 112 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 USP17L6PQ6QN14 398 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 RFPL4BQ6ZWI9 263 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 REXO1Q8N1G1 1221 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 ACSF2Q96CM8 615 aaPredicted RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 TBC1D14Q9P2M4 693 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 TMCC2O75069 709 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 CAPN1P07384 714 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 KRT76Q01546 638 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 PFKPQ01813 784 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 ALX1Q15699 326 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 CENPUQ71F23 418 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 PPM1NQ8N819 430 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
MATR3-227ENST00000618441 COA7Q96BR5 231 aa12.7□□□□□ -0.38
MATR3-227ENST00000618441 ZFYVE19Q96K21 471 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms