RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 DYNC1LI2O43237 492 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 IL2RBP14784 551 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 VAMP7P51809 220 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ATP6AP1LQ52LC2 224 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF667Q5HYK9 610 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SAMD4BQ5PRF9 694 aaKnown RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 FRMD7Q6ZUT3 714 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 PID1Q7Z2X4 250 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ZNF589Q86UQ0 364 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 XXYLT1Q8NBI6 393 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 TUBGCP5Q96RT8 1024 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 A1CFQ9NQ94 594 aaKnown RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 STAP1Q9ULZ2 295 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SNX7Q9UNH6 387 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 H7C2Y5 167 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 PSIP1O75475 530 aaKnown RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 FAM228BP0C875 321 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 DEFA5Q01523 94 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 MTHFSDQ2M296 383 aaKnown RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CCDC28AQ8IWP9 274 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SDR42E1Q8WUS8 393 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 NSMCE2Q96MF7 247 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CINPQ9BW66 212 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 RNF38Q9H0F5 515 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 AKT3Q9Y243 479 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 EFR3BQ9Y2G0 817 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 HIST1H2AGP0C0S8 130 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 IFI30P13284 250 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 HIST1H2ADP20671 130 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CNTFP26441 200 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 ENPEPQ07075 957 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 MIS18BP1Q6P0N0 1132 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 GLYCTKQ8IVS8 523 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 HIST1H2AHQ96KK5 128 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 HIST1H2AJQ99878 128 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 H2AFJQ9BTM1 129 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 EDARQ9UNE0 448 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SIN3BO75182 1162 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 GRIK1P39086 918 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 USP11P51784 963 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 PGDP52209 483 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 MED28Q9H204 178 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 DHX35Q9H5Z1 703 aaKnown RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 PEX14O75381 377 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CAPGP40121 348 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 AGPAT1Q99943 283 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 GPN1Q9HCN4 374 aaPredicted RBP15.47■□□□□ 0.07
COL5A1-208ENST00000618395 TCF7L2Q9NQB0 619 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 OGDHLQ9ULD0 1010 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 NDUFS3O75489 264 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 GALNTL6Q49A17 601 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 SAPCD2Q86UD0 394 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 CNKSR1Q969H4 720 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 GNPTGQ9UJJ9 305 aa15.47■□□□□ 0.07
COL5A1-208ENST00000618395 XIAPP98170 497 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 MTFR1Q15390 333 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 LRRC47Q8N1G4 583 aaKnown RBP15.46■□□□□ 0.07
COL5A1-208ENST00000618395 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 NADKO95544 446 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-208ENST00000618395 CHI3L1P36222 383 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-208ENST00000618395 USP46P62068 366 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 FAR1Q8WVX9 515 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 PDLIM1O00151 329 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 TULP2O00295 520 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 PLOD2O00469 737 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 IFNA7P01567 189 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 GCLMP48507 274 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 AFTPHQ6ULP2 937 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 ADHFE1Q8IWW8 467 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 PDPRQ8NCN5 879 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 TAMM41Q96BW9 452 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 CEP170P1Q96L14 293 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 CCNE2O96020 404 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 PGK1P00558 417 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 FAM102AQ5T9C2 384 aaPredicted RBP15.46■□□□□ 0.07
COL5A1-208ENST00000618395 SNRNP48Q6IEG0 339 aaKnown RBP15.46■□□□□ 0.07
COL5A1-208ENST00000618395 TC2NQ8N9U0 490 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 AMNQ9BXJ7 453 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 METTL21EPA6NDL7 271 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 FOLH1Q04609 750 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 MSANTD1Q6ZTZ1 278 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 VN1R5Q7Z5H4 357 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 SLCO6A1Q86UG4 719 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 SFRP1Q8N474 314 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 MYDGFQ969H8 173 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 DCAF5Q96JK2 942 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 SH3GLB2Q9NR46 395 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
COL5A1-208ENST00000618395 MAGEB16A2A368 324 aa15.46■□□□□ 0.06
COL5A1-208ENST00000618395 MAGEA8P43361 318 aa15.46■□□□□ 0.06
COL5A1-208ENST00000618395 ANKRD40Q6AI12 368 aa15.46■□□□□ 0.06
COL5A1-208ENST00000618395 RAPGEF6Q8TEU7 1601 aa15.46■□□□□ 0.06
COL5A1-208ENST00000618395 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.06
COL5A1-208ENST00000618395 CYP21A2P08686 494 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 RGS4P49798 205 aa15.45■□□□□ 0.06
COL5A1-208ENST00000618395 TTC30BQ8N4P2 665 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms