RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 IL4RP24394 825 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 NDUFV1P49821 464 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 ADCY1Q08828 1119 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 B4GALNT4Q76KP1 1039 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 ARCQ7LC44 396 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 HOOK3Q86VS8 718 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 HASPINQ8TF76 798 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 CENPIQ92674 756 aaPredicted RBP18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 FAM149B1Q96BN6 582 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 RNF157Q96PX1 679 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 TBCBQ99426 244 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 TSPYL1Q9H0U9 437 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 TDRD15B5MCY1 1934 aaKnown RBP18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 TLDC2A0PJX2 215 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 FAM200BP0CF97 657 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 PDK2Q15119 407 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 EFHC1Q5JVL4 640 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 LHX8Q68G74 356 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 MAP7D3Q8IWC1 876 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 SPATA18Q8TC71 538 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 PGBD4Q96DM1 585 aa18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 TPX2Q9ULW0 747 aaKnown RBP18.1■□□□□ 0.49
PCDHGC3-205ENST00000617641 MOXD2PA6NHM9 499 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 MCF2LO15068 1137 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 B3GAT3O94766 335 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 BRCC3P46736 316 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 TFDP2Q14188 446 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 KYNUQ16719 465 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 C1orf228Q6PIY5 440 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 FAM35AQ86V20 835 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 DEFB106AQ8N104 65 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 ZCCHC9Q8N567 271 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 EPS8L3Q8TE67 593 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 RSAD2Q8WXG1 361 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 MAGEB5Q9BZ81 275 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 LRRC4Q9HBW1 653 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 CALCOCO1Q9P1Z2 691 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 A0A1W2PQ45 241 aaPredicted RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 A0A1W2PQY0 241 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 MDM4O15151 490 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 RBP3P10745 1247 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 MAGOHP61326 146 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 GNGT1P63211 74 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 PPARDQ03181 441 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 GRIK3Q13003 919 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 MBTPS1Q14703 1052 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 NOMO1Q15155 1222 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 ANKRD20A8PQ5CZ79 823 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 PPP6R3Q5H9R7 873 aaPredicted RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 ERMARDQ5T6L9 678 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 TRAF7Q6Q0C0 670 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 PQLC3Q8N755 202 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 FAM71DQ8N9W8 422 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 NCAPGQ9BPX3 1015 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 TMEM30AQ9NV96 361 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 NINJ2Q9NZG7 142 aa18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.09■□□□□ 0.49
PCDHGC3-205ENST00000617641 AP1G2O75843 785 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 TTC4O95801 387 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 ODC1P11926 461 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 ACTN2P35609 894 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 MATKP42679 507 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLCO1A2P46721 670 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 MRPS5P82675 430 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 RNASEH2BQ5TBB1 312 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 EMC10Q5UCC4 262 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 CD300LGQ6UXG3 332 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZNF598Q86UK7 904 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZC3H18Q86VM9 953 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 CCDC185Q8N715 623 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 KCTD13Q8WZ19 329 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 P3H4Q92791 437 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 SMOQ99835 787 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 RTP3Q9BQQ7 232 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
PCDHGC3-205ENST00000617641 IRAK1P51617 712 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TKTL1P51854 596 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 NRLP54845 237 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TUSC3Q13454 348 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 RTN4RL1Q86UN2 441 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 SIX6OS1Q8N1H7 587 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TAB3Q8N5C8 712 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 PLD5Q8N7P1 536 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TLCD1Q96CP7 247 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 KCNK16Q96T55 309 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 RHOBTB2Q9BYZ6 727 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 DHX35Q9H5Z1 703 aaKnown RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 HMX1Q9NP08 348 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 SQORQ9Y6N5 450 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 TSC2P49815 1807 aa18.07■□□□□ 0.48
PCDHGC3-205ENST00000617641 F8W810 466 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms